Query= MSMg01no488_b11.b1 MSMg01no488_b11.b1 CHROMAT_FILE:
MSMg01no488_b11.b1 PHD_FILE: MSMg01no488_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:54 2005
(666 letters)
>mm_chr15_6491953_6493018
Length = 1066
Score = 1224 bits (633), Expect = 0.0
Identities = 653/661 (98%), Gaps = 4/661 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatg--tttcgaaaccttcgcagtgtaatagtggtcagcataaagaaagcattt 62
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gaattcaatgcatt--gaaaccttcgcagtgtaatagtggtcagcataaagaaagcattt 806
Query: 63 gagaacttgttaggaattttttgttactgtattcccaattttaaaaagtatgaaagtgtt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gagaacttgttaggaattttttgttactgtattcccaattttaaaaagtatgaaagtgtt 746
Query: 123 tcgaacattttgtatcttaggacaatgctgtacttacaggaaaaagaaataataataaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcgaacattttgtatcttaggacaatgctgtacttacaggaaaaagaaataataataaaa 686
Query: 183 attcctaaaaaatatgcactttttactccacagactatcccatctgtcagtctgggctcg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 attcctaaaaaatatgcactttttactccacagactatcccatctgtcagtctgggctcg 626
Query: 243 tatgttctcttaaaggagtgtgtggtgagaataaataagatatttctataaaatcagaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatgttctcttaaaggagtgtgtggtgagaataaataagatatttctataaaatcagaac 566
Query: 303 agtttaattcaagaaagtgaactgatagaaatatcccagacccctcttctctgtgaatct 362
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 565 agtctaattcaagaaagtgaactgatagaaatatcccagacccctcttttctgtgaatct 506
Query: 363 gcgtgtttcttttcaccttttaaagaatgaaaacccacttatcctgtgaaataaggatgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcgtgtttcttttcaccttttaaagaatgaaaacccacttatcctgtgaaataaggatgc 446
Query: 423 ccacagtcactgtctacccatctggggaactctgaaccttgcctgttctttagttcagtg 482
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 ccacagtcactgtctacacatctggggaactctgaaccttccctgttctttagttcagtg 386
Query: 483 atgtgtcctctgggacaagcctaagggaaactgtatcagcattcagttaaagacggaggt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgtgtcctctgggacaagcctaagggaaactgtatcagcattcagttaaagacggaggt 326
Query: 543 ggattttgtcttatcaaacaggaagtatagtgatctaagtttggtcttactgtttcccat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggattttgtcttatcaaacaggaagtatagtgatctaagtttggtcttactgtttcccat 266
Query: 603 catcatttcacataaagtgatttacatggataccctcttcccatctggaatgggagcatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catcatttcacataaagtgatttacatggataccctcttcccatctggaatgggagcatt 206
Query: 663 t 663
|
Sbjct: 205 t 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b11.g1 MSMg01no488_b11.g1 CHROMAT_FILE:
MSMg01no488_b11.g1 PHD_FILE: MSMg01no488_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:54 2005
(632 letters)
>mm_chr15_6346576_6347607
Length = 1032
Score = 1129 bits (584), Expect = 0.0
Identities = 625/654 (95%), Gaps = 26/654 (3%)
Strand = Plus / Plus
Query: 1 tttgcgaagatggaaagtgcttagcgaatgcacctttcgactttaagcattttaggcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcgaagatggaaagtgcttagcgaatgcacctttcgactttaagcattttaggcata 260
Query: 61 gtagggaatagcatagtatttatgtagaagaggtaacgtacatataccatgaagcagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagggaatagcatagtatttatgtagaagaggtaacgtacatataccatgaagcagaca 320
Query: 121 ctcataaggagtaatgtgacaatgaggcatggctgaggaagaacgctggaactcaggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcataaggagtaatgtgacaatgaggcatggctgaggaagaacgctggaactcaggaaa 380
Query: 181 atgtaagaagcaggagaaggatgagaagcagcacgacaaccagggacaactgcaaaacaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaagaagcaggagaaggatgagaagcagcacgacaaccagggacaactgcaaaacaa 440
Query: 241 agcttttaa----acagtaagtcggagccttgctggataagtagatacctgaacaggtga 296
||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agc----aacaaaacagtaagtcggagccttgctggataagtagatacctgaacaggtga 496
Query: 297 ggatattccaagctacagacaacactctcacaggttttgtaggtacagaacaaatcccat 356
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 497 ggatattccaagctacagacaacactctcacaggttctgtaggtacagaacaaatcccat 556
Query: 357 caaatctcgtcccagcccatctacagtggtgctaacgctcagctcctgatgtgggaactc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caaatctcgtcccagcccatctacagtggtgctaacgctcagctcctgatgtgggaactc 616
Query: 417 ttctgcagcgtatcggatgcattcgtgctctgtttgaaagtctagatgcagaggcttcct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttctgcagcgtatcggatgcattcgtgctctgtttgaaagtctagatgcagaggcttcct 676
Query: 477 gcaaccagcatctgtggaagcttcatgagttgctgctgtagactactttcttacttctat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 677 gcaaccagcatctgtggaagcttcatgagttgctgctgtagactactttcttatttctat 736
Query: 537 gagttgctgctgtagactactttctt------------------acttctatgagttgct 578
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 737 gagttgctgctgtagactactttcttgctgtagactactttcttacttctatgagttgct 796
Query: 579 gctgtagactactttcttgctgtagactactttcttacttctatgagttgctgc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gctgtagactactttcttgctgtagactactttcttacttctatgagttgctgc 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
