Query= MSMg01no489_f23.b1 MSMg01no489_f23.b1 CHROMAT_FILE:
MSMg01no489_f23.b1 PHD_FILE: MSMg01no489_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:35 2005
(623 letters)
>mm_chr15_7204229_7205250
Length = 1022
Score = 1102 bits (570), Expect = 0.0
Identities = 608/622 (97%), Gaps = 5/622 (0%)
Strand = Plus / Minus
Query: 4 gaattcttatc--tttcgcattgaatgcacggtctacatgcgttgagaaacaacattggt 61
||||||||||| | | |||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 838 gaattcttatcagtat--cattgaatgcacggcctacattcgttgagaaacaacattggt 781
Query: 62 gggagcttcatgggtgtgagatggaggagacaattcagaagagtgcggtggcttccatct 121
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggaagcttcatgggtgtgagatggaggagacaattcagaagagtgcggtggcttccatct 721
Query: 122 caggcctcgtggagtcacacagggcctggttttatctgtgtttatttccttctcggtgag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 caggcctcgtggagtcacacagggcctggttttatctgtgtttatttccttctcggtgag 661
Query: 182 catcaagtgctgcataattaggatcattgtccaagactggaagcttggaatgtgctgagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 catcaagtgctgcataattaggatcattgtccaagactggaagcttggaatgtgctgagg 601
Query: 242 ggctgcggtgcagtgccaggagctccggactgatgactgccgtttttctggaaccttcca 301
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 600 ggctgcggtgcagtgccaggagctccggactgataactgccg-ttttctggaaccttcca 542
Query: 302 tgggctctccaagcctcagtttattccttagtaaagtagatcttgatgtctggatagaag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgggctctccaagcctcagtttattccttagtaaagtagatcttgatgtctggatagaag 482
Query: 362 gagttgggggaagatggtcaggaaggagagaggaggtaatgccatgcatgtacgacaatg 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaggtgggggaagatggtcaggaaggagagaggaggtaatgccatgcatgtacgacaatg 422
Query: 422 ccatatttcataaaacaacttgaaatctggttaattaaagaagaatggaagttgggacaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 ccatatttcataaaacaacttgaaatctggttaattaaagaagaatggaagttaggacaa 362
Query: 482 agaaggcatgaggtgacaagagatgtgtcccttttctttgtgaaggtcctggggaggctg 541
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 agaaggcatgaggtgacaagagatgtgtcccttttctttgtgaaggtcccggggaggctg 302
Query: 542 gaagtggtcgttatggacctgggtatatcaccaatcccggtgtgagtgaagatgatgatg 601
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagtggtcattatggacctgggtatatcaccaatcccggtgtgagtgaagatgatgatg 242
Query: 602 gatctgaagacgaactggacct 623
||||||||||||||||||||||
Sbjct: 241 gatctgaagacgaactggacct 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1022
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1012
Effective search space: 620356
Effective search space used: 620356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_f23.g1 MSMg01no489_f23.g1 CHROMAT_FILE:
MSMg01no489_f23.g1 PHD_FILE: MSMg01no489_f23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:35 2005
(503 letters)
>mm_chr15_7082880_7083782
Length = 903
Score = 949 bits (491), Expect = 0.0
Identities = 501/505 (99%), Gaps = 2/505 (0%)
Strand = Plus / Plus
Query: 1 ctccatgctggctccaggagttcagggacagggcttgctgtttcctgtggcacgcacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccatgctggctccaggagttcagggacagggcttgctgtttcctgtggcacgcacagc 260
Query: 61 caaggctgcacctccgtcctgcattatttgttgagtagatgagcaaataaagaaaaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggctgcacctccgtcctgcattatttgttgagtagatgagcaaataaagaaaaacct 320
Query: 121 taagaaataatcttgcctgatttttggtcagaattcttcggagtttgttatctgagttct 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 taagaaataatcttgcctgatttttggtcagaattcttcggagtctgttatctgagttct 380
Query: 181 ccacctaggctctaggccttaccatgtgtgttacagttaacacactctcagattgttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacctaggctctaggccttaccatgtgtgttacagttaacacactctcagattgttgcc 440
Query: 241 ttaaatctcatccttctgccatgaaattcaagtcggaagtgttaaaaacaaaacaaaaca 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ttaaatctcatccttctgccatgaaattcaagtcggaagtattaaaaacaaaacaaaaca 500
Query: 301 caacacagccccttttagtaagtcatagtgatttccaagagatagcccaaattttcactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caacacagccccttttagtaagtcatagtgatttccaagagatagcccaaattttcactt 560
Query: 361 ttgatttcaatggagcagccatttacatgggagtgaataattcagatgcttttttttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgatttcaatggagcagccatttacatgggagtgaataattcagatgcttttttttttt 620
Query: 421 taa--tttttttttcttaatgtgatgttttggttcttcgggcttgcgactgaccaatgag 478
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaattttttttttcttaatgtgatgttttggttcttcgggcttgcgactgaccaatgag 680
Query: 479 ctgtgccaagctcaggtatgttgtt 503
|||||||||||||||||||||||||
Sbjct: 681 ctgtgccaagctcaggtatgttgtt 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
