Query= MSMg01no491_b06.b1 MSMg01no491_b06.b1 CHROMAT_FILE:
MSMg01no491_b06.b1 PHD_FILE: MSMg01no491_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:52 2005
(146 letters)
>mm_chr15_83374481_83375027
Length = 547
Score = 230 bits (119), Expect = 2e-65
Identities = 134/139 (96%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttgccttactccaacccagaaaacctgtatgaaatctcagcactatcctgag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gaattcatttgccttacaaaaacccagaaaacctgtatgaaatctcagcactatcctgag 284
Query: 65 ttaaatatatatataaaaa-gggggggcacagtcagaaaacacctcagttagggtgccgg 123
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 283 ttaaatatatatataaaaagggggggggacagtcagaaaacacctcagttagggtgccgg 224
Query: 124 cacctctaggggttggggg 142
|||||||||||||||||||
Sbjct: 223 cacctctaggggttggggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 547
Length adjustment: 8
Effective length of query: 138
Effective length of database: 539
Effective search space: 74382
Effective search space used: 74382
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no491_b06.g1 MSMg01no491_b06.g1 CHROMAT_FILE:
MSMg01no491_b06.g1 PHD_FILE: MSMg01no491_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:52 2005
(475 letters)
>mm_chr15_83219212_83220086
Length = 875
Score = 888 bits (459), Expect = 0.0
Identities = 473/481 (98%), Gaps = 6/481 (1%)
Strand = Plus / Plus
Query: 1 attctatagagaatggtagggaaaagacccctgagagtgcttggagtgaaagacagaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 attctatagagaatggtagggaaaagacccctgagagtgcttggagtgaaagacagaggt 254
Query: 61 gtaaacacctaaggaaaagcatgtcaggacagccaagacatggatgctccaa------aa 114
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 255 gtaaacacctaaggaaaagcatgtcaggacagccaagacatggatgctccaaaaaaccaa 314
Query: 115 aaccaaaaccaaaaccaaaatcaaattaaacagaaaccgaaaaaaccttgaaaggtgtag 174
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaccaaaaccaaaaccaaaaccaaattaaacagaaaccgaaaaaaccttgaaaggtgtag 374
Query: 175 tagtacagcctggtttagagagttccaggacagcaaaggctgttactcagagaagccctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tagtacagcctggtttagagagttccaggacagcaaaggctgttactcagagaagccctg 434
Query: 235 tctcaaacaaacagacagacaaacaaacaaacagagaggctggggtggggatgatctcgc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tctcaaacaaacagacagacaaacaaacaaacagagaggctggggtggggatgatctcgc 494
Query: 295 ccatgagtaaaaggcaggctgctagggattaggttacaattcccaaggacttgtgtgaca 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccatgagtaaaaggcaggctgctagggattaggttacaattcccaaggacttgtgtgaca 554
Query: 355 aagcatgatacattgtctaaactggtctccaaagtcaagcacttacatcagggattctca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagcatgatacattgtctaaactggtctccaaagtcaagcacttacatcagggattctca 614
Query: 415 actttcctaatgctgcaaccctttaatacagttcctcatgctgtggtgaccccaaccata 474
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 actttcccaatgctgcaaccctttaatacagttcctcatgctgtggtgaccccaaccata 674
Query: 475 a 475
|
Sbjct: 675 a 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
