NNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTACCAGATCTTCAAAGAAGAGCTAATACCAATACTCTTCAAA
TTATTCCACAACATAGAAACAGAAGGAACACTGAAAAATTCATTTTATAA
GGCCACAGTCACCCTGATTTCTAAACTATATAAAAACTCGACCAAATAAG
AGAATTTCAGACCAATATCCTTTATGAACATTGATGCAAAAATACTCAAT
AAAATATTTGCAAACTGAATTAAAAAACACATCAAAAACATCATCTACCA
TGATCAAGCAGGCTTTAGCCCAGAGATGCAGGGGTAGTTCAACATACAAA
AATCCATAAACATAACCCACCATATTAACAAACTGAAAGAAAAAGCCCAC
ATGATCATCTCATATGTTGAAAAAGTCTTTAACAAAATCCAGCACCCCTT
CACGTTAAATGTCTTGGAGAGATCAGGGGTACAAAACACACATCTAAACA
TAGTAAAAGCAATATACAGCAAGCCAAGAGCCAACATTAAATTGAATGTT
AAATCAATTCTACTAAAATCAGGGACAAGGCAAAGCTATCCGCTCTCTTT
GTATTTATTCAATATAATACTTGAAGTTTTAGCTAGAGCAATAAGACAAC
TAAAGGAGATCAAGGGGATTCAAACGGGAAAGGAAGACATCAAAGTATTA
ATACTTGCTGATAATATGATACTATAGACAACTG

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATTCACACTTGTTAAATATG
AACACACACACACATGTTGTTTTATAAACAGAACTGAATTCAAAAGGTAA
AAAGCAAGTGAGAATGGGGGAGAATGTTTGCATAGCACATCACCTTGGAC
ATAAATAAACCTGGATTGTAGCCTATGGATGAGGAATATGCATTGTATGT
CAGTCACATCCCTTCCAGAAGTTCACTTTCTGCCCTGCAAGGAAGCGTAA
AAGCATACATAGCACATGGACGATGACTACAGGCTAGGTGGCTGATGAAT
ATGCACCAAGAGGAGACAGAAAAAGAAGCTGGTTTTAAACACTATCTGGG
ATTTAGGAAGATAGAAATTTCCCAGGGGTGTGCTTAGTATATTACAAATA
TCAATTAAAATTTCCTTATGATAAGCCTGCTTATTTGCCATTAAAGGCAA
GTGGACTCTACATACATACATATATACATACATACATACACATTTGATCC
TAGTATTAACATGTGGAAGGAGCAAATAGGGTTGAGGGTTGTCCTATGAT
TTCTGTGAGGTTTCTGTGATATGCACGTGAGTGTACACACACACACATAA
GCACACACACACACTTTAAATCATAAAATTCTTTTAAAAATATTTTTATA
TTTGCTCAGTGTCGGTGGGGGGGGGGGAGTATGTGCTA

Query= MSMg01no493_b18.g1 MSMg01no493_b18.g1 CHROMAT_FILE:
MSMg01no493_b18.g1 PHD_FILE: MSMg01no493_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:32 2005
         (632 letters)



>mm_chr15_12609014_12610043
          Length = 1030

 Score = 1031 bits (533), Expect = 0.0
 Identities = 597/631 (94%), Gaps = 25/631 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattcacacttgttaaatatgaacacacacacacatgttgttttataaacagaactgaat 60
           |||||||||| |||||| ||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 627 cattcacactagttaaaaatga--acacacacacatgttgttttataaacagaactgaat 570

                                                                       
Query: 61  tcaaaaggtaaaaagcaagtgagaatgggggagaatgtttgcatagcacatcaccttgga 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 569 tcaaaaggtaaaaagcaagtgagaatgggggagaatgtttgcatagcacatccccttgga 510

                                                                       
Query: 121 cataaataaacctggattgtagcctatggatgaggaatatgcattgtatgtcagtcacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cataaataaacctggattgtagcctatggatgaggaatatgcattgtatgtcagtcacat 450

                                                                       
Query: 181 cccttccagaagttcactttctgccctgcaaggaagcgtaaaagcatacatagcacatgg 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 449 cccttccagaagttcactttctgccctgcaaggaagcataaaagcatacatagcacatgg 390

                                                                       
Query: 241 acgatgactacaggctaggtggctgatgaatatgcaccaagaggagacagaaaaagaagc 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 acgatggctacaggctaggtggctgatgaatatgcaccaagaggagacagaaaaagaagc 330

                                                                       
Query: 301 tggttttaaacactatctgggatttaggaagatagaaatttcccaggggtgtgcttagta 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tggttttaaagactatctgggatttaggaagatagaaatttcccaggggtgtgcttagta 270

                                                                       
Query: 361 tattacaaatatcaattaaaatttccttatgataagcctgcttatttgccattaaaggca 420
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 269 tattacaaatatcaattaaaatttccttacgataagcctgcttatttgccattaaaggca 210

                                                                       
Query: 421 agtggactctacatacatacata--ta------tacatacatacatacaca--------- 463
           |||||||||||||||||||||||  ||      ||||||||||||||||||         
Sbjct: 209 agtggactctacatacatacatacatacatacatacatacatacatacacacatacatac 150

                                                                       
Query: 464 ---tttgatcctagtattaacatgtggaaggagcaaatagggttgagggttgtcctatga 520
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acatttgatcctagtattaacatgtggaaggagcaaatagggttgagggttgtcctatga 90

                                                                       
Query: 521 tttctgtgaggtttctgtgatatgcacgtgagtgtacacacacacacataagcacacaca 580
           | ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 89  tctctgtgagggttctgtgatatgcacgtgagtgtacacacacaca--taagcacacaca 32

                                          
Query: 581 cacactttaaatcataaaattcttttaaaaa 611
           ||||||||||||||||||||||||| |||||
Sbjct: 31  cacactttaaatcataaaattcttt-aaaaa 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1030
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1020
Effective search space:   634440
Effective search space used:   634440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)