Query= MSMg01no493_e21.b1 MSMg01no493_e21.b1 CHROMAT_FILE:
MSMg01no493_e21.b1 PHD_FILE: MSMg01no493_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:47 2005
(591 letters)
>mm_chr15_56488913_56489902
Length = 990
Score = 841 bits (435), Expect = 0.0
Identities = 461/479 (96%), Gaps = 17/479 (3%)
Strand = Plus / Minus
Query: 129 aaaacctttttaaaacaagag----caatcaatcaatcagtctctctctc---------- 174
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 990 aaaacctttttaaaacaagagcaatcaatcaatcaatcagtctctctctctctctctctt 931
Query: 175 --tctctctctctctttatctctctctctctttctcagacaaaaagcaaataagataatt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 tatctctctctctctttatctctctctctctttctcagacaaaaagcaaataagataatt 871
Query: 233 ttccccaagcaaaataaaccattttactatggacaagttgaatcataatatattaatatt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ttccccaagcaaaataaaccattttactatggacaagttgaatcataatatattaatatt 811
Query: 293 agataataatgataatatatccagagttaatggtatcatgattagaataagccccacctg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 agataataatgataatatatccagagttaatggtatcatgattagaataagccccacctg 751
Query: 353 ctatccacaaaatatttcttttctggaatcaaaactttttacattcatttttttcatgta 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 750 ctatccacaaaatatttcttttctggaatcaaaactttttacattca-ttttttcatgta 692
Query: 413 agttaattggagatttacatggtgggataatcattctaacagagcccatgctgttgaact 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agttaattggagatttacatggtgggataatcattctaacagagcccatgctgttgaact 632
Query: 473 ctttaaatccattctcttactagttacatgttgtaaaactgtcttaacaatactaggaac 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctttaaatccattctcttactagttacatgttgtaaaactgtcttaacaatactaggaac 572
Query: 533 agcaaggcaagtttgacacaatccttcaatcctgcttaggtatcccctgctatacttgg 591
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 571 agcaaggcaagtttgacacaatccttcaatcctgcttaagtatcccctgctatacttgg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 990
Length adjustment: 10
Effective length of query: 581
Effective length of database: 980
Effective search space: 569380
Effective search space used: 569380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_e21.g1 MSMg01no493_e21.g1 CHROMAT_FILE:
MSMg01no493_e21.g1 PHD_FILE: MSMg01no493_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:47 2005
(572 letters)
>mm_chr15_56410125_56411096
Length = 972
Score = 1098 bits (568), Expect = 0.0
Identities = 571/572 (99%)
Strand = Plus / Plus
Query: 1 agtgactgaaactgcagttgctgctgtttaaagtcaatgggtggcagggcctgattgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgactgaaactgcagttgctgctgtttaaagtcaatgggtggcagggcctgattgctc 260
Query: 61 tgttgagttgcttaaattcgtttaagagaatagatacactcttaaattagtaaactatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgagttgcttaaattcgtttaagagaatagatacactcttaaattagtaaactatgc 320
Query: 121 caatgccctcaaaaaatggtctacaaaaatgactcactcctgttacactgtcagttggag 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 caatgccctcaaaaaatggtctacaaaaatgacttactcctgttacactgtcagttggag 380
Query: 181 cacattagtcatctgcaggtctcttctcatccttcagttgttggagtgactgtcattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacattagtcatctgcaggtctcttctcatccttcagttgttggagtgactgtcattgag 440
Query: 241 agatactcaaggttgacttctaagagagggagatagagttgttactctcctatgttatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatactcaaggttgacttctaagagagggagatagagttgttactctcctatgttatgt 500
Query: 301 gggtactcccaaatcccaagggcatttctattacattctcttaatcagtcacaagggttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtactcccaaatcccaagggcatttctattacattctcttaatcagtcacaagggttg 560
Query: 361 agaagaagattttatctcttgcactaattgtgacaatattttataggctgtaatgtattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaagaagattttatctcttgcactaattgtgacaatattttataggctgtaatgtattg 620
Query: 421 tctagtttgtctatcacatgtctatctacctattaccaacctacctgcttatctactttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctagtttgtctatcacatgtctatctacctattaccaacctacctgcttatctactttt 680
Query: 481 cctattaaaatgtagaccttatgaggatggttttaactgttctttattatgtcactggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctattaaaatgtagaccttatgaggatggttttaactgttctttattatgtcactggtg 740
Query: 541 aatggaacagtagttagtacatagttactcaa 572
||||||||||||||||||||||||||||||||
Sbjct: 741 aatggaacagtagttagtacatagttactcaa 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
