Query= MSMg01no493_i18.b1 MSMg01no493_i18.b1 CHROMAT_FILE:
MSMg01no493_i18.b1 PHD_FILE: MSMg01no493_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:08 2005
(616 letters)
>mm_chr15_3448287_3449302
Length = 1016
Score = 1147 bits (593), Expect = 0.0
Identities = 608/613 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagagccctgccctcatttgatcttgcattaatagctactttctgattattttc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ggaattcagagccctgacctcatttgatcttgcattaatagctactttctgattattttc 757
Query: 64 ttccaagtgcgctgtactcacctgtgagcagccaagagaattgcttgtcaactcagcctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttccaagtgcgctgtactcacctgtgagcagccaagagaattgcttgtcaactcagcctg 697
Query: 124 tctcagctttgattttaaggtctctatgtaactgtggagccagacccctatttctgccca 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tctcagctttggttttaaggtctctatgtaactgtggagccagacccctatttctgccca 637
Query: 184 gtgcagaatatccaaagagggaaaggggtaacaaataaaagttcctgagactctcaccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gtgcagaatatccaaagagggaaaggggtaacaaataaaagttcctgagactctcaccag 577
Query: 244 aaagtctatagctagcagtggagtggttgtttggtacggaagtccatcacaggcagatgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaagtctatagctagcagtggagtggttgtttggtacggaagtccatcacaggcagatgc 517
Query: 304 atgaacacgatttgcaaatgttttcacaactgcatgatttttggcccacacatatgctga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgaacacgatttgcaaatgttttcacaactgcatgatttttggcccacacatatgctga 457
Query: 364 gtcctggaagctttatctgcaagcatgaccgacataatggtttgtttttatgaatggtca 423
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 456 gtcctggaagctttatctgcaagcatgactgacataatggtttgtttttatgaatggtga 397
Query: 424 actccaaaagaggatacatttttctataaatctatatattctgtcttccaaagaggaggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actccaaaagaggatacatttttctataaatctatatattctgtcttccaaagaggaggt 337
Query: 484 ttgtttgttttagttttagttttgttttgctgttgattacccacttggaaaacagtgaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttgtttgttttagttttagttttgttttgctgttgattacccacttggaaaacagtgaat 277
Query: 544 attttaaaaagaaagaagaggaaggggtctggaggattgtttcagccgttaagagccctt 603
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 276 attttaaaaagaaagaagaggaaggggtctggagaattgtttcagccgttaagagccctt 217
Query: 604 gctgtttctttca 616
|||||||||||||
Sbjct: 216 gctgtttctttca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_i18.g1 MSMg01no493_i18.g1 CHROMAT_FILE:
MSMg01no493_i18.g1 PHD_FILE: MSMg01no493_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:08 2005
(639 letters)
>mm_chr15_3280933_3281971
Length = 1039
Score = 1191 bits (616), Expect = 0.0
Identities = 634/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Plus
Query: 1 atagcagggtgagattgttgatggcttttctaacttgtttattgaaataaaaattggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atagcagggtgagattgttgatggcttttctaacttgtttattgaaataaaaattggcac 259
Query: 61 agtaacaactgaaaagagtatagaggctactcaataatgaaaactaaagttaccatatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtaacaactgaaaagagtatagaggctactcaataatgaaaactaaagttaccatatga 319
Query: 121 tccagtgatttttttattaataatttatatcccaaggaaataagattaatatgttaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccagtgatttttttattaataatttatatcccaaggaaataagattaatatgttaaaga 379
Query: 181 tacatttgcctgatcatgataactgtagccaaaatatggatcaacttgggccctttgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacatttgcctgatcatgataactgtagccaaaatatggatcaacttgggccctttgatg 439
Query: 241 aacaaatgtttagaaaaaaaa-gggatattttggaatatacaagagagcagatttgaaac 299
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacaaatgggtagaaaaaaaaagggatattttggaatatacaagagagcagatttgaaac 499
Query: 300 tgtcagttcaaaaatatctgtgaaaaatatatccattcatagctctgctgaaccatctta 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtcagttcaaaaacatctgtgaaaaatatatccattcatagctctgctgaaccatctta 559
Query: 360 ccacatataaatatttcaaaacatcattaacatgataattaatgataattttacataata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccacatataaatatttcaaaacatcattaacatgataattaatgataattttacataata 619
Query: 420 tatgattatgtgattagtgtaattactctcaggctatttgaaaaaatatttaatctagtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatgattatgtgattagtgtaattactctcaggctatttgaaaaaatatttaatctagtt 679
Query: 480 tactgagatgtaagcatcagaagtcttcacagattttattatctaacataaaaccaccat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tactgagatgtaagcatcagaagtcttcacagattttattatctaacataaaaccaccat 739
Query: 540 ttttgctaatatcactatggatccttttggggtaagtcttactacattggaaggcaaatt 599
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 740 ttttgctaatatcacaatggatccttttggggtaagtcttactacgttggaaggcaaatt 799
Query: 600 atggttgtagatatacattgttaaaaactctattctgcct 639
||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atggttgtagatatacattgttaaaaactctattctgcct 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
