Query= MSMg01no493_j24.b1 MSMg01no493_j24.b1 CHROMAT_FILE:
MSMg01no493_j24.b1 PHD_FILE: MSMg01no493_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:14 2005
(597 letters)
>mm_chr15_18614138_18615134
Length = 997
Score = 1131 bits (585), Expect = 0.0
Identities = 591/593 (99%)
Strand = Plus / Minus
Query: 5 gaattccacaaagaatatgaaatataaaattattcagttgacgctgtgaagaaaattttt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gaattccacaaagaaaatgaaatataaaattattcagttgacgctgtgaagaaaattttt 738
Query: 65 ctgtgttttgtgaacatgtatattaaatgggtaattgaatgtgtggctatatgaatccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ctgtgttttgtgaacatgtatattaaatgggtaattgaatgtgtggctatatgaatccct 678
Query: 125 acaaatgaatggaaaaataaagggaattaaataccctgttctattatcctatattttatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acaaatgaatggaaaaataaagggaattaaataccctgttctattatcctatattttatt 618
Query: 185 ttccagagatagcatctctctgatattgaagaaagctaggtgtctctctctgtccccctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttccagagatagcatctctctgatattgaagaaagctaggtgtctctctctgtccccctg 558
Query: 245 tacctgtgaatgtcaaagctcttgtgttgcatctccttaaaaaatattgtattaaattcg 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 557 tacctgtgaatgtcaaagctcttgtgttgcatctccttaaaaaatattgtattatattcg 498
Query: 305 acatataacacaggggtaagacatcactatagaactaacattcagtagatagaattatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acatataacacaggggtaagacatcactatagaactaacattcagtagatagaattatct 438
Query: 365 tcccctatagattaaacatcttatcaaccaagtaaacaaagtgtccctattgaattgtgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcccctatagattaaacatcttatcaaccaagtaaacaaagtgtccctattgaattgtgt 378
Query: 425 tgcacatgtactagaggaaaatcccagagaactggtaaatacttccaaaacttgctacct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgcacatgtactagaggaaaatcccagagaactggtaaatacttccaaaacttgctacct 318
Query: 485 ggagtggggggaaaacatgtgaaatgaataaagattcactgagttctagaaccttgtctt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggagtggggggaaaacatgtgaaatgaataaagattcactgagttctagaaccttgtctt 258
Query: 545 gtcaaaatattgtttttacataatacagtgaattctagcatccttggttagaa 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtcaaaatattgtttttacataatacagtgaattctagcatccttggttagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_j24.g1 MSMg01no493_j24.g1 CHROMAT_FILE:
MSMg01no493_j24.g1 PHD_FILE: MSMg01no493_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:14 2005
(517 letters)
>mm_chr15_18485786_18486703
Length = 918
Score = 978 bits (506), Expect = 0.0
Identities = 515/518 (99%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 1 ttcacatttgatgcaatcaaatccagtttctgaaaggcctgaggagcagtggccctatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacatttgatgcaatcaaatccagtttctgaaaggcctgaggagcagtggccctatgc 260
Query: 61 ttgatgcatacaatgaataacctccctcgagtattctgtcatggagacattttgagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgatgcatacaatgaataacctccctcgagtattctgtcatggagacattttgagaatt 320
Query: 121 taaagtttacctcctgtcactatatgagcaattgatattttaaaat-ggggggggggcgg 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 taaagtttacctcctgtcactatatgagcaattgatattttaaaatgggggggggggcgg 380
Query: 180 aattaatatggaggtctctgttgtgaggataccttattaaatcatgttggattttttccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattaatatggaggtctctgttgtgaggataccttattaaatcatgttggattttttccc 440
Query: 240 cctcaggaatgaggtccaaagcaaaagtagtttctattctgtttgcctgaactaataatt 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcaggaatgaggcccaaagcaaaagtagtttctattctgtttgcctgaactaataatt 500
Query: 300 ggaactttataattaactgcattcagttagtacataaatcacagaaaacagctctactcc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaactttataattaactgcattcagttagtacataaatcacagaaaacagctctactca 560
Query: 360 aagactctcctttgagaggagctctgcctccattggttagggtcattaagaatgtaatgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagactctcctttgagaggagctctgcctccattggttagggtcattaagaatgtaatgg 620
Query: 420 ccttttaagcctgaaatctaggagagtgaatcagagtgtcctaatgcactggttaatgat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttttaagcctgaaatctaggagagtgaatcagagtgtcctaatgcactggttaatgat 680
Query: 480 gccttcgtactaccaattactagcaaacccattgcatt 517
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccttcgtactaccaattactagcaaacccattgcatt 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space: 460356
Effective search space used: 460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
