Query= MSMg01no493_p17.b1 MSMg01no493_p17.b1 CHROMAT_FILE:
MSMg01no493_p17.b1 PHD_FILE: MSMg01no493_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:42 2005
(665 letters)
>mm_chr15_17864336_17865401
Length = 1066
Score = 1257 bits (650), Expect = 0.0
Identities = 659/662 (99%), Gaps = 1/662 (0%)
Strand = Plus / Minus
Query: 5 gaattcagatttat-tcacatgaatattgttatttgtttaaaaaaagaaataggtttatt 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gaattcagatttatataacatgaatattgttatttgtttaaaaaaagaaataggtttatt 807
Query: 64 agcctgcaaaggggaaaggcagtcttgtagtaatggaaaacccaccccataggcattttt 123
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 806 agcctgcaaaggggaaaggcagtcttgtagtaacggaaaacccaccccataggcattttt 747
Query: 124 ctaatgttacttccaaagttttacttaagatatgaaatagaattagtaagtagcatagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctaatgttacttccaaagttttacttaagatatgaaatagaattagtaagtagcatagga 687
Query: 184 cagatattatttttgacacatctaattttctttgccaagttatttttaatattaatttca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cagatattatttttgacacatctaattttctttgccaagttatttttaatattaatttca 627
Query: 244 tgaaactagataagaaaacataaataccaagcttttatagtctcatccatatcataagta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgaaactagataagaaaacataaataccaagcttttatagtctcatccatatcataagta 567
Query: 304 attaccacaaataattagtcatcaattttgaggcagattgcttagggaaacataagacag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 attaccacaaataattagtcatcaattttgaggcagattgcttagggaaacataagacag 507
Query: 364 tctgtggatattctctgctactaatatgtttttaaatttcaagatgaatagggacaatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tctgtggatattctctgctactaatatgtttttaaatttcaagatgaatagggacaatga 447
Query: 424 gaaaagcaagagaaaaataattttgaccatacataacacagcattatttaattacagaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaaaagcaagagaaaaataattttgaccatacataacacagcattatttaattacagaac 387
Query: 484 acttattgtagttgaatagaattaattaatctcataatattatatatacacatgtatgta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acttattgtagttgaatagaattaattaatctcataatattatatatacacatgtatgta 327
Query: 544 tatataggtaaaataaaagcaagaaaaaaataaagaagtaatctgaaatgagttctatat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tatataggtaaaataaaagcaagaaaaaaataaagaagtaatctgaaatgagttctatat 267
Query: 604 ttacattaatcaatatatattgaaaacattctagttgttttaattacattaataatagac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttacattaatcaatatatattgaaaacattctagttgttttaattacattaataatagac 207
Query: 664 ac 665
||
Sbjct: 206 ac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1066
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1056
Effective search space: 691680
Effective search space used: 691680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_p17.g1 MSMg01no493_p17.g1 CHROMAT_FILE:
MSMg01no493_p17.g1 PHD_FILE: MSMg01no493_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:42 2005
(673 letters)
>mm_chr15_17716074_17717146
Length = 1073
Score = 1294 bits (669), Expect = 0.0
Identities = 672/673 (99%)
Strand = Plus / Plus
Query: 1 tgtcatgggaaagagatgtttgacagagtcatttgtttccttaggatctatatttcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcatgggaaagagatgtttgacagagtcatttgtttccttaggatctatatttcctct 260
Query: 61 gaaattattagagaattctaaaaatattttaatcattttctttattattatgcaacttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaattattagagaattctaaaaatattttaatcattttctttattattatgcaacttgt 320
Query: 121 aatgttatatggcacttatttttcttaaatcattaattctactccagcaaaattaccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgttatatggcacttatttttcttaaatcattaattctactccagcaaaattaccaac 380
Query: 181 taaagaagcaagtcatcaatagaaaaacataaaattagctggctaatgaagagaaatata 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 taaagaagcaagtcatcaatagaaaaatataaaattagctggctaatgaagagaaatata 440
Query: 241 agattcgataagcattaaccactaaactgatgcatattaaaactttatgctacaaatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agattcgataagcattaaccactaaactgatgcatattaaaactttatgctacaaatgtt 500
Query: 301 tgtgtctgatggattcatggatattttaatttccaggtttacatttataatgattttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtctgatggattcatggatattttaatttccaggtttacatttataatgattttcac 560
Query: 361 atgcaatgctttacaatacaaagcaagttgctttttctgaatattgaatatttattagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgcaatgctttacaatacaaagcaagttgctttttctgaatattgaatatttattagta 620
Query: 421 tatcttttgttgtaaagttctaattccaaaatatcttcccctatccactcgatatcagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcttttgttgtaaagttctaattccaaaatatcttcccctatccactcgatatcagaa 680
Query: 481 aatggtgtggccattcatcatgatctaacaagagaaaagtgatggaaataaagaaaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatggtgtggccattcatcatgatctaacaagagaaaagtgatggaaataaagaaaataa 740
Query: 541 aaagacattaagaaacatttattgacctatcacatatatttttataaatcaaaaattact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagacattaagaaacatttattgacctatcacatatatttttataaatcaaaaattact 800
Query: 601 tttttctacaaaaataaaagagcacaattctgtgtgtccacagtctgtctctgtctctct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttttctacaaaaataaaagagcacaattctgtgtgtccacagtctgtctctgtctctct 860
Query: 661 ctttttctgactc 673
|||||||||||||
Sbjct: 861 ctttttctgactc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
