Query= MSMg01no494_g08.b1 MSMg01no494_g08.b1 CHROMAT_FILE:
MSMg01no494_g08.b1 PHD_FILE: MSMg01no494_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:13 2005
(409 letters)
>mm_chr15_9476800_9477608
Length = 809
Score = 756 bits (391), Expect = 0.0
Identities = 403/407 (99%)
Strand = Plus / Plus
Query: 1 aataagaaaaagatggctacatccagactaaagggtaatggaggattcaaagagaaagtc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 aataagaaaaagatggctacatccaggctaaagggtaatggaggattcaaagagaaagtc 260
Query: 61 ctgaagttcagaactctagccatacaccaaaatgttggcattcttggaagttagtctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaagttcagaactctagccatacaccaaaatgttggcattcttggaagttagtctgat 320
Query: 121 ctctcctcttcattctatagtgacctaaatattattatcaccagggtcccatggttccaa 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ctctcctcttcattctatagtgacctaaatattaatatcaccagggtcccatggttccaa 380
Query: 181 gcaaagattttccttcaatagactcacctatttcccatttggattcaaaggagggaacat 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaaagatttcccttcaatagactcacctatttcccatttggattcaaaggagggaacat 440
Query: 241 tatttcaatattgttcctcccttttcatgccacaaccatgcctttaaagggaaatgactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttcaatattgttcctcccttttcatgccacaaccatgcctttaaagggaaatgactc 500
Query: 301 agagccaagataacgaaaatcttggtttcatattgtaaaatatgaaaaaatatgtaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagccaagataacgaaaatcttggtttcatattgtaaaatatgaaaaaatatgtaaaat 560
Query: 361 aggtttcatattgtagttctctatgcaggattttatattaaaattga 407
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 aggtttcatattgtagttctctatgcaggattttattttaaaattga 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_g08.g1 MSMg01no494_g08.g1 CHROMAT_FILE:
MSMg01no494_g08.g1 PHD_FILE: MSMg01no494_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:14 2005
(503 letters)
>mm_chr15_9651756_9652658
Length = 903
Score = 973 bits (503), Expect = 0.0
Identities = 503/503 (100%)
Strand = Plus / Minus
Query: 1 catatgaagggagacttcccccaagccaacaacacacttcagttccagttcaatggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 catatgaagggagacttcccccaagccaacaacacacttcagttccagttcaatggttct 644
Query: 61 gagtgagggaattcagagtccagggaggagtgaaatcagaaaacaagtagtagaatggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gagtgagggaattcagagtccagggaggagtgaaatcagaaaacaagtagtagaatggtc 584
Query: 121 agatattgaaaaaattcaataaaatggaaaatattcatatttcccttttcctaccctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agatattgaaaaaattcaataaaatggaaaatattcatatttcccttttcctaccctctg 524
Query: 181 cacaaattccagatgccctatctcgatctgcatggcctttgtcatctttgtctctgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cacaaattccagatgccctatctcgatctgcatggcctttgtcatctttgtctctgtctt 464
Query: 241 ttaaaagcagaatactccaaagtacataggtgacaaggaagatcagcaacgctgtccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttaaaagcagaatactccaaagtacataggtgacaaggaagatcagcaacgctgtccttg 404
Query: 301 tctcttcatcatttattgtctctcctgccacatgggagcttttgagactcattcattccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tctcttcatcatttattgtctctcctgccacatgggagcttttgagactcattcattccc 344
Query: 361 atttgtcagttgtggctgctctttcctggactactgagtccttgaaagtgaattcttacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atttgtcagttgtggctgctctttcctggactactgagtccttgaaagtgaattcttacc 284
Query: 421 tttacttttaccctggtaatttcacatttttgagtcttagattacactctttgatctatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tttacttttaccctggtaatttcacatttttgagtcttagattacactctttgatctatt 224
Query: 481 tttgatgtctgactctttcccgt 503
|||||||||||||||||||||||
Sbjct: 223 tttgatgtctgactctttcccgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
