Query= MSMg01no495_i02.b1 MSMg01no495_i02.b1 CHROMAT_FILE:
MSMg01no495_i02.b1 PHD_FILE: MSMg01no495_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:35 2005
(636 letters)
>mm_chr15_61243888_61244923
Length = 1036
Score = 1185 bits (613), Expect = 0.0
Identities = 631/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 1 aaagacaggatgagttaacattgctgggaaactttaactcatgtgaatcactcttgtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagacaggatgagttaacattgctgggaaactttaactcatgtgaatcactcttgtctt 260
Query: 61 cattctggcaatttagtccctgttctaaagtcaaacaaattaggttagcaagttcttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattctggcaatttagtccctgttctaaagtcaaacaaattaggttagcaagttcttcct 320
Query: 121 gttgtaggtccaggtaggagagaagtaggtacttgcatctctctctattccaagtgatga 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gttgtaggtccaggtaggagagaagtaggtacttgcatctctctctagcccaagtgatga 380
Query: 181 atctgcctattgtcttccatgaaccatttctctatactcaggcttctcaaacttttttat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 atctgcctattgtcttccatgaaccatttctctatactcaggcttctcaaacttttctat 440
Query: 241 gtatatcagaatgatctcgggatcttttaaaatcatatcctgatgcattagtcaagagat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatgtcagaatgatctcgggatcttttaaaatcatatcctgatgcattagtcaagagat 500
Query: 301 acccccagcatttagaatttctaacaggctcccagatgctattgctgtggattgatccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acccccagcatttagaatttctaacaggctcccagatgctattgctgtggattgatccat 560
Query: 361 ttagcataatgaacaatggggcctaggaataatggtctccatgttcaaatgtgatggcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagcataatgaacaatggggcctaggaataatggtctccatgttcaaatgtgatggcat 620
Query: 421 aataatgaactcagttctgcagtccatccagtacatgttaagggcaagagaattcttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aataatgaactcagttctgcagtccatccagtacatgttaagggcaagagaattcttcat 680
Query: 481 agagcataaaaattgtagaggtcatt-gaaatacaaacacaaaatcctaaagatgagaaa 539
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 agagcataaaaactgtagaggtcatttgaaatacaaacacaaaatcctaaagatgagaaa 740
Query: 540 caatcatagtcctctgggttttcatagacatattggaaggatctaagacttcagaactag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caatcatagtcctctgggttttcatagacatattggaaggatctaagacttcagaactag 800
Query: 600 aagtagtgtcttattccaagaaagttctattccaagt 636
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagtagtgtcttattccaagaaagttctattccaagt 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_i02.g1 MSMg01no495_i02.g1 CHROMAT_FILE:
MSMg01no495_i02.g1 PHD_FILE: MSMg01no495_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:35 2005
(606 letters)
>mm_chr15_61404270_61405276
Length = 1007
Score = 1089 bits (563), Expect = 0.0
Identities = 596/607 (98%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 1 ggcatttcccaagtaatagtgggcagggttttagaattctcaggctttcaagcttacact 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 807 ggcatttcccaagtaatagtgggcagggttttagaaatctcaggctttcaagcttacact 748
Query: 61 aagctctggttttctg-aaaatacatgaacatgggatgcgatgccccatcctctaacgat 119
|||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aagctctgattttttgaaaaatacatgaacatgggatgcgatgccccatcctctaacgat 688
Query: 120 tcaggagagatgatctactactgtctttatatttaaaatgcctctttcctgtcaaacaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 687 tcaggagagatgatctactactgtctttatatttaaaatgcctctttcctgccaaacaac 628
Query: 180 acataaatatttaaataacaattgtactctaggttcataactcgtgaatcatttattgta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 627 acataaatatttaaataacaattgtactctaggttcataactcgtgaatcatttattgaa 568
Query: 240 tgtttttggacttgacatgctcactgcagttgaaacaggaagtggaaaggtaggaagcaa 299
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgtacttggacttgacatgctcactgcagttgaaacaggaagtggaaaggtaggaagcaa 508
Query: 300 aaagtcctggactccaggcttaaaagattttgaatcccttacatctcccactaattattc 359
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 507 aaagtcctggactccaggtttaaaagattttgaatcccttagatctcccactaattattc 448
Query: 360 tcccgatctctccttatacaaatcacacctgagacactgttccacaggatgcctagtgaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcccgatctctccttatacaaatcacacctgagacactgttccacaggatgcctagtgaa 388
Query: 420 atgtttaggaaatgtttgcttcaagcatggaagcacataatagtcgtgtgaccaggtgca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgtttaggaaatgtttgcttcaagcatggaagcacataatagtcgtgtgaccaggtgca 328
Query: 480 gactgaaaacaagagagtgagggagctgggtgaaagagaagtcatcctttgtgcttactt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gactgaaaacaagagagtgagggagctgggtgaaagagaagtcatcctttgtgcttactt 268
Query: 540 cattcctgtgaagacggttgctagttcagcttgcattagttactctgcgctatttctggg 599
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 267 cattcctgtgaagacggttgctagttcagcttgcattagttactttgcgctatttctggg 208
Query: 600 tatgttc 606
|||||||
Sbjct: 207 tatgttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space: 594212
Effective search space used: 594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
