NNNNNNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTTTGTTTTCTTCAGAGCCCCATTTTTTAATGGTGT
TATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGAT
ATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGT
TGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTT
GGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCC
ATTGCTGTTCTGTTCAGGAATTTTTTTTTTGTGCCCATATCTTCAAGGCT
TTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAA
GTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGA
TCGATTCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATT
GTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGA
AGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTA
TTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTAT
CACAATTGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAG
AAGTTCTTTTATCCTTGA

NNAAACCACACGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTATTTCTGAAG
GTTAGTTTTGCTGGGAATAGAAACTTGGTTGATAGTTTTGTTCTTGTAAG
GCTTTATTATCTCAGCCCACAATCTTTAGGAATCTGCTTCATTGCAGGTC
TTGTTGAACCACATGTCACTCTCCCCTGTTGACCCAAGGAAACATTTGAC
CATCAGGATCTGAGGATGGTGGGCGTGCCTTGTAGACCCCTTTATCTTCT
TCTGACTCAGAACACACTGAGCTTCTGGTCTGCCCTCTGATTTCTGTGTG
TGTGCACACATGGAAACCTTCCCAGTCCTTTCTGTCCTCCCTTTCTGGGA
CTCCTCTAATGCTTAGCAGCACACCACACATCCTTGAGCCTCTGTTCAGT
TTTCTTCACTGTTCTTTTGGTTTTCTATGGACTGGAAAGCTCCACTCACC
CACCTGCCTTCAAGCTTGCTGACATTCCTCTGACTTTTTGAGTCTGCTGC
ATAATCCTTCTAAAGAACTTTCCACATATGACCTTGTATCTCCTACTCTA
TAATTCTAAAATCACAGCTCTATACCCTCCCTCAGATCCTCTATTTGGTG
AGATAATGCTCTTCTAGTTTCATTCAGTTTCTAGACATAATTTTCCTTTA
CTCTCTGAATATACTTAAAGTGA

Query= MSMg01no497_i11.g1 MSMg01no497_i11.g1 CHROMAT_FILE:
MSMg01no497_i11.g1 PHD_FILE: MSMg01no497_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:15 2005
         (637 letters)



>mm_chr15_88052265_88053301
          Length = 1037

 Score = 1180 bits (610), Expect = 0.0
 Identities = 631/638 (98%), Gaps = 1/638 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttatttctgaaggttagttttgctgggaatagaaacttggttgatagttttgttcttg 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 atttatttctgaaggttagttttgctgggaatagaatcttggttgatagttttgttcttg 260

                                                                       
Query: 61  taaggctttattatctcagcccacaatctttaggaatctgcttcattgcaggtcttgttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaggctttattatctcagcccacaatctttaggaatctgcttcattgcaggtcttgttg 320

                                                                       
Query: 121 aaccacatgtcactctcccctgttgacccaaggaaacatttgaccatcaggatctgagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccacatgtcactctcccctgttgacccaaggaaacatttgaccatcaggatctgagga 380

                                                                       
Query: 181 tggtgggcgtgccttgtagacccctttatcttcttctgactcagaacacactgagcttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtgggcgtgccttgtagacccctttatcttcttctgactcagaacacactgagcttct 440

                                                                       
Query: 241 ggtctgccctctgatttctgtgtgtgtgcacacatggaaaccttcccagtcctttctgtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtctgccctctgatttctgtgtgtgtgcacacatggaaaccttcccagtcctttctgtc 500

                                                                       
Query: 301 ctccctttctgggactcctctaatgcttagcagcacaccacacatccttgagcctctgtt 360
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 ctccctttctgggactcctctaatgtttagcagcacaccacacatccttgagcctctgtt 560

                                                                       
Query: 361 cagttttcttcactgttcttttggttttctatggactggaaa-gctccactcacccacct 419
           |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 cagttttcttcattgttcttttggttttctatggactggaaaagctccactcacccacct 620

                                                                       
Query: 420 gccttcaagcttgctgacattcctctgactttttgagtctgctgcataatccttctaaag 479
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 621 gccttcaagcttgctgacattcctatgactttttgagtctgctgcctaatccttctaaag 680

                                                                       
Query: 480 aactttccacatatgaccttgtatctcctactctataattctaaaatcacagctctatac 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactttccacatatgaccttgtatctcctactctataattctaaaatcacagctctatac 740

                                                                       
Query: 540 cctccctcagatcctctatttggtgagataatgctcttctagtttcattcagtttctaga 599
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 cctccctcagatcctctatttggtgagataatgctcttctagtttcgttcagtttctaga 800

                                                 
Query: 600 cataattttcctttactctctgaatatacttaaagtga 637
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cataattttcctttactctctgaatatacttaaagtga 838


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)