NTTCCCTATCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCAAGATTCTAGGACATTCAGCACGCTGTGGAGGTG
GATCCCCACCCAGTACTGAGACTTCATGCCCATTCCCTGCCCAGCAGACT
CCAGAATCTACCATGCAGTCTGGGCCCGAGAGAGTGGTATCTCCCAGAGT
GGACCCTCACCACATCTCCTTGTTTATCTCATTTGGCCTAGCATCCTCAG
CGCTGCTGTGGCCTGAAAGATGCTATGCTGTCTCTTTCACTTCTGCTTTG
AGAAGCTGCAATGAAAAAAATGAGGCTTTTGAAGCTTTTATCACATCTGT
GTTTGAATACCTTAAACATAGTTCACGTTGCATCTGGGACAGGAGTCTCT
TCCCGATGAAGACTTGGTAATATTCTCTTGCAGTTTGTACAAGGTCTATT
CATTTATCACTTGGCAAGCATATTCAGGTCCATCCACAGAATGGAAATTA
GACAAAAAGCAAGATAAATCTCACAGAAAACAAAGAAACAGGCGGGAAAA
TTGAGGGGTTTCTGTATTAGAAAACCAATGGAATGTTCCAGGAAGCAATA
CACAACACCTGTAGTTTTGTTTGCCTGTGAGAGAACAGACAAATCTCTGA
GAAATGTAACTCTAAGCATAAAACACAAACAAATACTTAAATTTATAGGG
TGCTGTGTGTGGCTTTATGTTGAGTAAAAATATAGTTTTTGAATTCCCA

NNNNNNCCAATGACAAGNNNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGCTGGTTATCTCTGCTGT
GCTGCTGCTTCTCTGCATGCCATANGCTGCTAGAGACCCTGACAGGTGGA
ATAANAGTTGTAGCANGTTGCTTGAGTGGGTGTGTCTGAGAAACAGGNTG
GTGGTGGGTAATTATCTGTGTGTTGGAGGGTGGAGTCTGGGGTGTCTACA
TCCTTTGGTTTGCCTANATTTTCAAATGGAGGGGGCTTAAATTGAGANNN
TNNNNNNNNNNNNNNNAAAATTTTTTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAAAGAAAAAGGTGGGGCCATTTTAAAATGGTTTAAAGGTTTT
CCGGGAAAAATCCTTTCTCGGGCCCAAAAAAATTTCCCAAAAATTTGAAA
AAACTTTTTTTTAGACCGGTTTTTTTTCTTTTTAAAAAAATTTTTTTAAA
ACCCCGTTTTTTTAAAAAATATTTGGCCCCTCTTTTTGGGGTTTATATAT
AAACAAAAATTTTTCCCCAAACTTTTGGGGATTTTTTCCTTAAAAACCCC
CTTAAAAAAAATAAAAAAAGGGGGGGGGCATTTTTTTATAACCCCCTTTT
TAAATCTTTGAAAAAAAAACCCCCCCCCCCCCCGCCCTAAAAAAAATCTT
GGGGNNAAAAACCAACCCAATTAATTTCTATTTATTGGTGGGTGGGGGGT
TTGTT

Query= MSMg01no497_j19.b1 MSMg01no497_j19.b1 CHROMAT_FILE:
MSMg01no497_j19.b1 PHD_FILE: MSMg01no497_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:22 2005
         (544 letters)



>mm_chr15_86361593_86362536
          Length = 944

 Score =  779 bits (403), Expect = 0.0
 Identities = 445/463 (96%), Gaps = 7/463 (1%)
 Strand = Plus / Minus

                                                                       
Query: 89  gcagtctgggcccgagagagtggtatctcccagagtggaccctcaccacatctccttgtt 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gcagtctgggcccgagagagtggtatctcccagagtggaccctcaccacatctccttgtt 885

                                                                       
Query: 149 tatctcatttggcctagcatcctcagcgctgctgtggcctgaaagatgctatgctgtctc 208
           ||||||||||||||||||||||||||| ||||||| |||||||||||| ||  | |||||
Sbjct: 884 tatctcatttggcctagcatcctcagcactgctgtagcctgaaagatgttacacagtctc 825

                                                                       
Query: 209 tttcacttctgctttgagaagctgcaatg-------aaaaaaatgaggcttttgaagctt 261
           |||||||||||||||||||||||||||||       ||||||| ||||||||||||||||
Sbjct: 824 tttcacttctgctttgagaagctgcaatgaaaaaaaaaaaaaaagaggcttttgaagctt 765

                                                                       
Query: 262 ttatcacatctgtgtttgaataccttaaacatagttcacgttgcatctgggacaggagtc 321
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ttatcacgtctgtgtttgaataccttaaacatagttcacgttgcatctgggacaggagtc 705

                                                                       
Query: 322 tcttcccgatgaagacttggtaatattctcttgcagtttgtacaaggtctattcatttat 381
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tcttcccgatgaagactcggtaatattctcttgcagtttgtacaaggtctattcatttat 645

                                                                       
Query: 382 cacttggcaagcatattcaggtccatccacagaatggaaattagacaaaaagcaagataa 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cacttggcaagcatattcaggtccatccacagaatggaaattagacaaaaagcaagataa 585

                                                                       
Query: 442 atctcacagaaaacaaagaaacaggcgggaaaattgaggggtttctgtattagaaaacca 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 atctcacagaaaacaaagaaacaggcgggaaaattgaggggtttctgtattagaaaacca 525

                                                      
Query: 502 atggaatgttccaggaagcaatacacaacacctgtagttttgt 544
           |||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 524 atggaatgttccaggaagcaatatgcaacacctgtagttttgt 482


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)