Query= MSMg01no497_k06.b1 MSMg01no497_k06.b1 CHROMAT_FILE:
MSMg01no497_k06.b1 PHD_FILE: MSMg01no497_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:24 2005
(660 letters)
>mm_chr15_21735932_21736994
Length = 1063
Score = 1180 bits (610), Expect = 0.0
Identities = 649/666 (97%), Gaps = 9/666 (1%)
Strand = Plus / Plus
Query: 1 agtcagcttcaagagaagtttgaggagaacagttgagttgaaccagccagtgcgaggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcagcttcaagagaagtttgaggagaacagttgagttgaaccagccagtgcgaggtca 260
Query: 61 gaaggaactagaaagggtgagcttattaatcagtaagctttgaagatggcaattatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggaactagaaagggtgagcttattaatcagtaagctttgaagatggcaattatatca 320
Query: 121 tttgaagaatagttccatgtacgtatgtcttgactcggaaccattcttggttttctttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgaagaatagttccatgtacgtatgtcttgactcggaaccattcttggttttctttct 380
Query: 181 ttcatggctgcaatgtgatgagcacactgtcatacaaaaagcactgaaattactttcttc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ttcatggctgcaatgtgatgagcacactgtcacacaaaaagcactgaaattactttcttc 440
Query: 241 ttta--tttttaaaaatgataggaccagcctcctacagactggagtctcagaaattatga 298
|||| || ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tttaggtt---aaaaatgataggaccagcctcctacagactggagtctcaaaaattatga 497
Query: 299 gccaaattatatgtttccttctttaaagtatctgtgggaatttgattatagttttaaaaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gccaaattatatgtttccttctttaaagtatctgtgggaatttgattatagttttaaaaa 557
Query: 359 gtcatacagagaatttagtactccatgttttatttctaactaaaaattagcttctataat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtcatacagagaatttagtactccatgttttatttctaactaaaaattagcttctataat 617
Query: 419 tctccaaatgattatatagataagtatatatatat----ttagttctaagttaccaaccc 474
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 618 tctccaaatgattatatagataagtatatatatatatatttagttctaagttaccaaccc 677
Query: 475 tatattcttattttttcacttcaaaacactcagtttgaagaatttttgcatgataataaa 534
| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 678 tttgttcttattttttcacttcaaaacactcagtttgaagaatgtttgcatgataataaa 737
Query: 535 tgaagaccaaaatgcatattcagtcataaaatatcacatgtttaagataattaaataatt 594
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 738 tgaagaccaaaatgcatattcagtcataaaatatcacatgtttaagatgattaaataatt 797
Query: 595 ccttcagattagtttatgtggtagataaacagccaaacacaaatataactaccactatga 654
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctttcagattactttatgtggtagataaacagccaaacacaaatataactaccactatga 857
Query: 655 atttaa 660
||||||
Sbjct: 858 atttaa 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1063
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1053
Effective search space: 684450
Effective search space used: 684450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_k06.g1 MSMg01no497_k06.g1 CHROMAT_FILE:
MSMg01no497_k06.g1 PHD_FILE: MSMg01no497_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:24 2005
(408 letters)
>mm_chr15_21878065_21878873
Length = 809
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 caacaaagtac-aaaaggaagaaaaaagataaaaaggaaaatccaattatagactggaca 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caacaaagtacaaaaaggaagaaaaaagataaaaaggaaaatccaattatagactggaca 283
Query: 60 gaaattgtaaaagtaagacagagagaaacaggcttatgaattttagttttaacatttaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaaattgtaaaagtaagacagagagaaacaggcttatgaattttagttttaacatttaag 223
Query: 120 cctcaaatattgtcagacttactattattattttaattaattattcaaagacataaatat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cctcaaatattgtcagacttactattattattttaattaattattcaaagacataaatat 163
Query: 180 tttaaatttagcccacagaaaatcattgctttcacccttgaacaaagcaacttctctttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tttaaatttagcccacagaaaatcattgctttcacccttgaacaaagcaacttctctttg 103
Query: 240 cagtagaaaccattacataaaacaaaaagcaatcaaattagagggagcaagtgacaacat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cagtagaaaccattacataaaacaaaaagcaatcaaattagagggagcaagtgacaacat 43
Query: 300 ggttatactggacccaaagcagaggaatgatcacagcatatc 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ggttatactggacccaaagcagaggaatgatcacagcatatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 809
Length adjustment: 9
Effective length of query: 399
Effective length of database: 800
Effective search space: 319200
Effective search space used: 319200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
