Query= MSMg01no499_d10.b1 MSMg01no499_d10.b1 CHROMAT_FILE:
MSMg01no499_d10.b1 PHD_FILE: MSMg01no499_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:33 2005
(300 letters)
>mm_chr15_57936956_57937655
Length = 700
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%)
Strand = Plus / Minus
Query: 1 ttagatctgttttttgtttgttttttttcctatttgcaagatatgagatgatttgggtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttagatctgttttttgtttgttttttttcctatttgcaagatatgagatgatttgggtat 620
Query: 61 tgtgggaattgatgtagttaaaacaattactgtttcttaatcagtacacagatgctttcc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 619 tgtgggaattgatgtagttaaaacaattattgtttcttaatcagtacacagatgctttcc 560
Query: 121 tgtttctattgttgacatgtttagacttaattggttaatataaaaatattttatatttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtttctattgttgacatgtttagacttaattggttaatataaaaatattttatatttag 500
Query: 181 cagcagaatagccttgtagatttcatgatctgtctgttttctagttgcctgaataaatta 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 499 cagcagaatagccttgtagatttcatggtctgtctgttttctagttgcctgaataaatta 440
Query: 241 ttttctcccaaataaagcatttattaaacaattttaaatggttgtagggtttttggacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttttctcccaaataaagcatttattaaacaattttaaatggttgtagggtttttggacaa 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_d10.g1 MSMg01no499_d10.g1 CHROMAT_FILE:
MSMg01no499_d10.g1 PHD_FILE: MSMg01no499_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:33 2005
(326 letters)
>mm_chr15_57803814_57804538
Length = 725
Score = 569 bits (294), Expect = e-166
Identities = 315/326 (96%), Gaps = 8/326 (2%)
Strand = Plus / Plus
Query: 1 taggactttcctccggtgctgaccaagatttgtgtatgttggtaagggcctttccaaagc 60
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 taggactttcctccggtgccgaccacgatttgtgtatgttggtaagggcctttccaaagc 260
Query: 61 gaccgccacagaaggtgacaaggacaaggaactatatgtggcatgatttatgaatacagg 120
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccgccgcagaaggtgacaagg-caaggaactatatgtggcatgatttatgaatacagg 319
Query: 121 tgcacttaccagagagtctgaatttgatgcttaatgtaattgtaccagtctgggtccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcacttaccagagagtctgaatttgatgcttaatgtaattgtaccagtctgggtccaaa 379
Query: 181 tcacccatttgtgcggaacaagcataacaaaagacataataaactcatagggaaccaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcacccatttgtgcggaacaagcataacaaaagacataataaactcatagggaaccaagt 439
Query: 241 aagagatgagaagggaacactggagggtactgaaagcccaaggagagtaccccagaagga 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 aagagatgagaagggaacactggag-------aaagcccaaggagagtaccccagaagga 492
Query: 301 cagactcacaggggttacctttgcca 326
||||||||||||||||||||||||||
Sbjct: 493 cagactcacaggggttacctttgcca 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 725
Length adjustment: 9
Effective length of query: 317
Effective length of database: 716
Effective search space: 226972
Effective search space used: 226972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
