Query= MSMg01no499_e07.b1 MSMg01no499_e07.b1 CHROMAT_FILE:
MSMg01no499_e07.b1 PHD_FILE: MSMg01no499_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:37 2005
(636 letters)
>mm_chr15_5871369_5872404
Length = 1036
Score = 1065 bits (551), Expect = 0.0
Identities = 621/663 (93%), Gaps = 32/663 (4%)
Strand = Plus / Plus
Query: 5 gaattcctagagatttc-tctgcctctgcctcccgaatgctggggcatcaggttctcagc 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gaattcctagaga-ttcatctgcctctgcctcccgaatgctggggcatcaggttctcagc 233
Query: 64 acccggcacagcttactagtcttttatgacctgcaaacaaataacgaactcatatttaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 234 acccggcacagcttactagtcttttatgacctgcaaacaaataacgaactcgtatttaat 293
Query: 124 gttttatgttgtcatctgggaaattcatcgtttctgttcagcctcacactattattgact 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gttttatgttgccatctgggaaattcatcgtttctgttcagcctcacactattattgact 353
Query: 184 gggttatttattattattatta----------------------------ta--attcca 213
|||||||||||||||||||||| || ||||||
Sbjct: 354 gggttatttattattattattattattattattattattattattattattattattcca 413
Query: 214 aatgtgtttctttgtattttgacctgtcaaatctttcattcacattattttacttttttc 273
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 414 aatgtgtttctttgtattttgacctgtcaaatctttcattcacattattttactattttc 473
Query: 274 tttagaataagaatctgtgtaaaataaatgaagaagagaaactgccgaagattttagaac 333
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgtagaataagaatctgtgtaaaataaatgaagaagagaaactgccgaagattttagaac 533
Query: 334 aggagaatatctaatactcagtccattagtgctgacagagctgcaggtggtggccataac 393
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aggagaacatctaatactcagcccattagtgctgacagagctgcaggtggtggccataac 593
Query: 394 atagtgcagtggggaaagacatctgctgcccgcagcacaagctaatcactgaccgtacag 453
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 594 atagtgcagtggggaaagacatctgctgcccgcagcacaatcttatcactgaccgtacag 653
Query: 454 ccagagaggcaagagccaaactaagatgatggaggtggctccatcatatccaatacatct 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ccagagaggcaagagccaaactaagatgatggaggtggctccatcatatccaatacatct 713
Query: 514 cctgcaaaagcaaatctgaagcgttacctagtctacatctagggaacaatgttggaatac 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cctgcaaaagcaaatctgaagcgttacctagtctacatctagggaacaatgttggaatac 773
Query: 574 agagccacatgcagcacgtggtcccccgcctgttggcacaagagcgaggaagtgatggag 633
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 agagccacatgcagcaggtggtcccccgcctgttggcacaagagcgaggaagtgatggag 833
Query: 634 acg 636
|||
Sbjct: 834 acg 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_e07.g1 MSMg01no499_e07.g1 CHROMAT_FILE:
MSMg01no499_e07.g1 PHD_FILE: MSMg01no499_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:37 2005
(637 letters)
>mm_chr15_6031404_6032439
Length = 1036
Score = 1178 bits (609), Expect = 0.0
Identities = 630/637 (98%), Gaps = 1/637 (0%)
Strand = Plus / Minus
Query: 1 aacttgtagaccttataaaggaaaccaacatgatgcatgaaaatatgttcaagccatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 aacttgtagaccttataaaggaaaccaacatgatgcatgaaaatatgttcaagccatttg 777
Query: 61 tctaataggacattaatatttaaagggaaatatctaaaattgcaaacattgaggcagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tctaataggacattaatatttaaagggaaatatctaaaattgcaaacattgaggcagttt 717
Query: 121 caattgaacaggcaagtacacagtgagataactttgcaaatttggtatatggataaacaa 180
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 716 caattgaacaggcaagtgcacagtg-gataactttgcaaatttggtatatggataaacaa 658
Query: 181 cagttaaatgaaaactggtgtggcattaaagctctgtttgcccatgctctatcgttttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cagttaaatgaaaactggtgtggcattaaagctctgtttgcccatgctctatcgttttac 598
Query: 241 ttgccaaaacaaagctttgctgattttgccgttcaaaatatgccttatcagcttcaaaac 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ttgccaaaacaaagctttgctgattttgccgttcaaaatatgccttatcagcttcaaaat 538
Query: 301 tacctttcatataggattcagtggtcctacactggtgaccacgagagaagtcagagcccc 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 537 tacctttcatataggattcagtggtcctacactggtgaccacgagataagtcagagcccc 478
Query: 361 acaaagaaattgttgagagatgcaccagagatgttgttaactgggagccatttaggaact 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 acaaagaaattgtttagagatgcaccagagatgttgttaactgggagccatttaggaact 418
Query: 421 gaaaggaaaccaggagttaaataatacttaaacaatatttagttttactagatgctctaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaaaggaaaccaggagttaaataatacttaaacaatatttagttttactagatgctctaa 358
Query: 481 cattattttgtccacgtaaagagactatttctgtctttatggtgtgatgttatatggtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cattattttgtccacgtaaagagactatttctgtctttatggtgtgatgttatatggtct 298
Query: 541 ctatgttatttggtttgcctcttcgcctttcccttccactccagcctgaaatgacttgtt 600
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 297 ctatgttacttggtttgcctcttcgcctttcccttccactccagcccgaaatgacttgtt 238
Query: 601 gttcagcagccgatagaaagttgtttgagtcagctaa 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 gttcagcagccgatagaaagttgtttgagtcagctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space: 643302
Effective search space used: 643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
