Query= MSMg01no499_i02.b1 MSMg01no499_i02.b1 CHROMAT_FILE:
MSMg01no499_i02.b1 PHD_FILE: MSMg01no499_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:54 2005
(696 letters)
>mm_chr15_66358441_66359536
Length = 1096
Score = 1324 bits (685), Expect = 0.0
Identities = 691/693 (99%)
Strand = Plus / Plus
Query: 4 ggaattccattggcgttcagttctgcaggttcctatgcatagtgacaacatattcttcat 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccattggcgcacagttctgcaggttcctatgcatagtgacaacatattcttcat 263
Query: 64 tctagtgatagtttcaaggcagatagcatcacatcacatcacatgatggacatgggagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctagtgatagtttcaaggcagatagcatcacatcacatcacatgatggacatgggagga 323
Query: 124 agtgatcatatagctggacagaaagccagagacagactgagggactgaccatttacacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtgatcatatagctggacagaaagccagagacagactgagggactgaccatttacacat 383
Query: 184 tctgaatgaagttccctcagatgtaaggatatcccactggcccgatttcttaaaagtcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgaatgaagttccctcagatgtaaggatatcccactggcccgatttcttaaaagtcct 443
Query: 244 accacctcttaacattgccacattgacaatgaaagtttcaacacatggacatctggagac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accacctcttaacattgccacattgacaatgaaagtttcaacacatggacatctggagac 503
Query: 304 aaacaatagcacctttttcaccgtctaaaatctgtgcacattttcaaatgcatccattta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaacaatagcacctttttcaccgtctaaaatctgtgcacattttcaaatgcatccattta 563
Query: 364 ttgtattgtatgtacaaacagtgtctatttcctattcagcttttatgaatattaataagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgtattgtatgtacaaacagtgtctatttcctattcagcttttatgaatattaataagc 623
Query: 424 ttgtttgcattgtttagttaaagtaagttagcaaggcatagctgcatgatggcagacatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgtttgcattgtttagttaaagtaagttagcaaggcatagctgcatgatggcagacatg 683
Query: 484 ctatacccatggtccaggcctctcacaaattctctaattaaaataaatgtttgaagttca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctatacccatggtccaggcctctcacaaattctctaattaaaataaatgtttgaagttca 743
Query: 544 ttatatttgggacaatgaggaaacattactccaggtggtctgtcctctgttactttttcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttatatttgggacaatgaggaaacattactccaggtggtctgtcctctgttactttttcc 803
Query: 604 tatcccttctctttcaactgacagtgtttttggaaagaaagaaaaattaatattattgtc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tatcccttctctttcaactgacagtgtttttggaaagaaagaaaaattaatattattgtc 863
Query: 664 ctgaaccaatgactattacatgtggaaattaag 696
|||||||||||||||||||||||||||||||||
Sbjct: 864 ctgaaccaatgactattacatgtggaaattaag 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_i02.g1 MSMg01no499_i02.g1 CHROMAT_FILE:
MSMg01no499_i02.g1 PHD_FILE: MSMg01no499_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:54 2005
(579 letters)
>mm_chr15_66409534_66410515
Length = 982
Score = 1085 bits (561), Expect = 0.0
Identities = 576/583 (98%), Gaps = 5/583 (0%)
Strand = Plus / Minus
Query: 1 caaatgtcccttcctg----ttttttttttttttaatctgaaaagggaagaaaagaaata 56
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caaatgtcccttcctgttttttttttttttttttaatctgaaaagggaagaaaagaaata 723
Query: 57 gcatcaacgcttgttacaaaaatatgggggatcaagtttacaaggtcgtgcctaagggga 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gcatcaacgcttgttacaaaaatatgggggatcaagtttacaaggtcgtgcctaagggga 663
Query: 117 tatagaatatcctgacatggcatcagtgaggttaagattcatagccaggacacactaggt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tatagaatatcctgacatggcatcagtgaggttaagattcatagccaggacacactaggt 603
Query: 177 gtaatgggaacaaacataaatattttaaatagaaatcttgtaagtgtgcaacatacaagg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtaatgggaacaaacataaatattttaaatagaaatcttgtaagtgtgcaacatacaagg 543
Query: 237 ctgttacttcaatgtacataaatagaatccgaagaggcagtttgccagttatgctaacat 296
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctgttacttcaatgtacagaaatagaatccgaagaggcagtttgccagttatgctaacat 483
Query: 297 ttcctaagatcaaacttccagcctgtaaatctaatcccccgtgactctcaggaatgagga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttcctaagatcaaacttccagcctgtaaatctaatcccccgtgactctcaggaatgagga 423
Query: 357 cctcaaaaggcagggacgatttccattctcttgtgaggagacaggagaatgagggaggcg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctcaaaaggcagggacgatttccattctcttgtgaggagacaggagaatgagggaggcg 363
Query: 417 gcagaattaggaacttttacgaaagacaatctattggacagacccttaaagtgaaactgt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcagaattaggaacttttacgaaagacaatctattggacagacccttaaagtgaaactgt 303
Query: 477 ggaacagggagcgagaaaggggagaaggaaacaaaaagaggaatgaaaaaagaccagaaa 536
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 302 ggaacagggagcgagaaaggggagaaggaaacaaaaagagaaatgaaaaaagaccagaaa 243
Query: 537 gcggtaaaaaaagagttcgttgtaaggatggtggaagtttgca 579
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcggt-aaaaaagagttcgttgtaaggatggtggaagtttgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 982
Length adjustment: 10
Effective length of query: 569
Effective length of database: 972
Effective search space: 553068
Effective search space used: 553068
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
