Query= MSMg01no501_f05.b1 MSMg01no501_f05.b1 CHROMAT_FILE:
MSMg01no501_f05.b1 PHD_FILE: MSMg01no501_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:08 2005
(651 letters)
>mm_chr15_63109276_63110326
Length = 1051
Score = 1154 bits (597), Expect = 0.0
Identities = 636/649 (97%), Gaps = 2/649 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttgttactttcgagcaaaaaataataataattccccctcttcaatcttcaagg 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ggaattcttgttacttaggagcaaaaaataataataattccccctcttcaatcttcaagg 792
Query: 64 attatattatgtatttgtgataaaaagttccaggcttgatctcttcagttgctgtctgtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 attatattatgtatttgtgataaaaagttccaggcttgatctcttcagttgctgtctgtg 732
Query: 124 tagcacatcctttgctgttagggataaataatgaagagacagatgtttgaaatgaacttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tagcacatcctttgctgttagggataaataatgaagagacagatgtttgaaatgaacttt 672
Query: 184 gaggttcacctgcaaaatacaactttgcttaagtaataattgttacagtttttttcagca 243
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 671 gaggttcatctgcaaaatacaactttgcttaagtaataattgttaaag-ttttttcagca 613
Query: 244 tactgaggaattttattctacatcttagttaagtggttactacccaatgagccttctgaa 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 612 tactgaggaattttattctacatcttagttaagtggtaactacccaatgagccttctaaa 553
Query: 304 attcatgtccaatgatacaacccagtataaactcatagcctatatgagcaataactaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 attcatgtccaatgatacaacccagtataaactcatagcctatatgagcaataactaata 493
Query: 364 tagcaatttcactctcattatgtgcttctt-aaaaaaacctgtgaaatcaaacattggat 422
|||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 492 gagcaatttcactttcattatgtgcttcttaaaaaaaaactgtgaaatcaaacattggat 433
Query: 423 gtttctttggtcatttttggtcattttcatttctctgttatctcccctgttaatcagttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gtttctttggtcatttttggtcattttcatttctctgttatctcccctgttaatcagttt 373
Query: 483 gatatcacaggctctggcatctgataactatttgaatcactaggcaatagcgattcacct 542
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 372 gatatcacaggctctggtatctgataactatttgaatcactaggcaatagtgattcacct 313
Query: 543 gtctctttattagaacgtcttcttgggcaattcccttgtcagccttgggcctccaattat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtctctttattagaacgtcttcttgggcaattcccttgtcagccttgggcctccaattat 253
Query: 603 tcagctggaaaatacagaggtgttgggaggggaatagcattggtaaaag 651
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcagctggaaaatacagaggtgttgggaggggaatagcattggtaaaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_f05.g1 MSMg01no501_f05.g1 CHROMAT_FILE:
MSMg01no501_f05.g1 PHD_FILE: MSMg01no501_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:08 2005
(641 letters)
>mm_chr15_62984185_62985225
Length = 1041
Score = 1087 bits (562), Expect = 0.0
Identities = 628/662 (94%), Gaps = 22/662 (3%)
Strand = Plus / Plus
Query: 1 acataggaacttaaaatatgtacatttaaataaagtgctacatagaaatcataggaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acataggaacttaaaatatgtacatttaaataaagtgctacatagaaatcataggaaata 242
Query: 61 aagagcccagggaagcacatacctaataatttaccagtttcagggactctctgaatagct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 243 aagagcccagggaagcacatacctaataatttaccagtttcagggactctatgaatagct 302
Query: 121 cttcctcccgtgaggaaatatgaaagtaggctccagagaagggcagaatgtccttccatg 180
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cttcctcccgtaaggaaataagaaagtaggctccagagaagggcagaatgtccttccatg 362
Query: 181 agaacagtgaagtcttttgcatgggctcaggcagaaactcaagaatttaacattacctac 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 363 agaacagtgaagtcttttgcatgggctcaggcagaaactcaagaagttaacattacctac 422
Query: 241 tacccaaaattcaatatactgaaagcagtgtatatt------------------ctgaat 282
||||||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 423 tacccaaaaggcaatatagtgaaagcagtgtatattctgaatatactgaatatactgaat 482
Query: 283 atactgaatatactgaaagcagacatattctagtaggttagtcacggagcttctcttgtc 342
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 483 atactgaatatactgaaagcagacatattctagtaggttagtgacagagcttctcttgtt 542
Query: 343 atctttaggtagaagaaagatgaaaagacatcaatgtttggtataccccacacaaacagc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atctttaggtagaagaaagatgaaaagacatcaatgtttggtataccccacacaaacagc 602
Query: 403 caattcaggaagtacag-ctaaaaccaagaactgcacaggttcagagcagccaaactttt 461
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 caattcaggaagtac-gactaaaaccaagaactgcacaggttcagagcagccaaactttt 661
Query: 462 ccattactcttaatactgatagggatggaaatcaatttctagaaagaagaagagactagc 521
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 662 ccattactcttaatactgatagggatggaaatcaatttctagaaagaagaagagaccagc 721
Query: 522 tgtttctgatgcttcaccattgtcagttattgattgtgactctctcctcttagactggtc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgtttctgatgcttcaccattgtcagttattgattgtgactctctcctcttagactggtc 781
Query: 582 aatggttttctttttttta--aaattttttacaaggtattttcctcatttacatttccaa 639
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aatggttttctttttttttttaaattttttacaaggtattttcctcatttacatttccaa 841
Query: 640 tg 641
||
Sbjct: 842 tg 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
