XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGA
ATTTACAAGTATATGAGTCTCCAGACTCCCTTCCATCTTGGGCTCCTTCC
TGAATCATGTCCTCCTCCATCCCTCTGCCCACTTCCCTCAACTCTGTCTC
AAAACAAGATCATACTCATAGTTATGATACCGAATCCTGCAATCACAGTA
GTCCTACCTAATTTTCAGAAAATAAATTGTAAGGTAGAACGGCAGTTACT
GAACTACTGAGACATTATTTGCTCAGAAATAACGACAATGAAACGAAGGT
GTTCTGGTATCCTTGAATGGTTTAGAAGAATACTGCTGTGTTAACCTACA
GAAACACTGTGATAAGCCAGCAACAGGTTAAAGACACTTGATATTTGCGG
ATATATATTTAAGGATATGTACCAGTGTCTCTGATAGGCTTTGTCTCTGG
CAAACATGCTGACTCTTGCTTTAGTTATACTTTTATCCCCCTTTTTCGTT
CCATGTACACTCTTCAGATGTGGCTTACCAACCCCACGGACACTGCTGCT
TCACTCATAAATCTAAATTTCCTTCCAACCTTCTCTCTACAGCTTTCTGT
AAATTTTCTGAAATTTAAATCACTTGAATATGGTAAGCCTCGATGTTTAC
AATATCTTCACCTTCCTCTTTAAACACATAGATCAACCACCGAATATGAA
TG

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAACTCTGAGCCCCATTTT
TAATGGGGTTATTTGATTTTCTGGAGTTGACCTTCTTGAGTTCTTTATAT
CTATATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTT
TCCCAAGGTGTTGGTGGCCATTTTGTCTTATTTACAGTGTCTTTTGACTT
ACAGAAGCTTTGCAATTTTATAAGGTCTCATTTGTTGATTCTCGATCTTA
TAGCACAAGCCACTGCTGTTCTATTTAGAAATTTTCCCCCTGTGCCCATA
TCTTCGAGGCTTTTCCCCACTCTCTTCTCTATAAGTTTCACTGTCTCTGG
TTTTATGTGGAGTTCCTTGATCCACTTAGATTTGACCTAGTACAAGGAGA
TAAGTATGGATCTGGATCGATTCACATTCTTCTACATGATAACCACCAGT
TGTGCCAGCACCATTTGTTGAAAATACTGTCTTTTTTCCACTAGATGGTT
TTAGCTCCCTTATCAAAGATCAAGTGACCATACGTGTGTGGGTTCATTTC
TGGGTCTTCAATTCTATTCCATTGGTCTACTTCTCTGGTGCTATACCAGT
ACATGCAGTTTGTATCACTATTTCTCTGTAGTACAGCTTTAGTTCAAGCA
TGGGCATTCCCCCAGAAGGTCTTTTTCCTTGGAGATAGT

Query= MSMg01no501_j24.b1 MSMg01no501_j24.b1 CHROMAT_FILE:
MSMg01no501_j24.b1 PHD_FILE: MSMg01no501_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:29 2005
         (555 letters)



>mm_chr15_57002474_57003434
          Length = 961

 Score =  953 bits (493), Expect = 0.0
 Identities = 539/557 (96%), Gaps = 6/557 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgaat-ttacaagtatatgagtctccagactcccttccatcttgggctcctt 63
           ||||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattatttgaataatagaagtatatgagtctccagactcccttccatcttgggctcctt 264

                                                                       
Query: 64  cctgaatcatgtcctcctccatccctctgcccacttccctcaactctgt-----ctcaaa 118
           |||||||||||||||||||||| ||||||||||||||||||||||||||     ||||||
Sbjct: 265 cctgaatcatgtcctcctccattcctctgcccacttccctcaactctgtctcagctcaaa 324

                                                                       
Query: 119 acaagatcatactcatagttatgataccgaatcctgcaatcacagtagtcctacctaatt 178
           ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 acaagatcatactcagagttatgatactgaatcctgcaatcacagtagtcctacctaatt 384

                                                                       
Query: 179 ttcagaaaataaattgtaaggtagaacggcagttactgaactactgagacattatttgct 238
            ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 385 ctcagaaaataaattgtaaggtagaacgtcagttactgaactactgagacattatttact 444

                                                                       
Query: 239 cagaaataacgacaatgaaacgaaggtgttctggtatccttgaatggtttagaagaatac 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagaaataacgacaatgaaacgaaggtgttctggtatccttgaatggtttagaagaatac 504

                                                                       
Query: 299 tgctgtgttaacctacagaaacactgtgataagccagcaacaggttaaagacacttgata 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgctgtgttaacctacagaaacactgtgataagccagcaacaggttaaagacacttgata 564

                                                                       
Query: 359 tttgcggatatatatttaaggatatgtaccagtgtctctgataggctttgtctctggcaa 418
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgcggatatatacttaaggatatgtaccagtgtctctgataggctttgtctctggcaa 624

                                                                       
Query: 419 acatgctgactcttgctttagttatacttttatccccctttttcgttccatgtacactct 478
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 acatgctgactcttgctttagttatacttttatccccctttttcgttccatgtacattct 684

                                                                       
Query: 479 tcagatgtggcttaccaaccccacggacactgctgcttcactcataaatctaaatttcct 538
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 685 tcagatgtggcttaccaaccccacggacactgctacttcactcataaatctaaatttcct 744

                            
Query: 539 tccaaccttctctctac 555
           |||||||||||||||||
Sbjct: 745 tccaaccttctctctac 761


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 961
Length adjustment: 10
Effective length of query: 545
Effective length of database: 951
Effective search space:   518295
Effective search space used:   518295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)