Query= MSMg01no502_a15.b1 MSMg01no502_a15.b1 CHROMAT_FILE:
MSMg01no502_a15.b1 PHD_FILE: MSMg01no502_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:59 2005
(316 letters)
>mm_chr15_12825488_12826203
Length = 716
Score = 611 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Minus
Query: 1 gaaacaactgcctgctctatcctgagccccttggcggcggtttgcacggttcacttttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaaacaactgcctgctctatcctgagccccttggcggcggtttgcacggttcacttttga 457
Query: 61 tcttcactaaagcacttatcagagcctctcctatataattcaggtttctagcatcctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcttcactaaagcacttatcagagcctctcctatataattcaggtttctagcatcctcat 397
Query: 121 cctaccctaggcaatcatgcctcccgaggactgggggttttgtggaacttggctttggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cctaccctaggcaatcatgcctcccgaggactgggggttttgtggaacttggctttggat 337
Query: 181 cccctaaaatacctgcaaactgcctcagcttaaaaggcccgggataaaggtctgctgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cccctaaaatacctgcaaactgcctcagcttaaaaggcccgggataaaggtctgctgaat 277
Query: 241 taaatctgtacgaagcgtcttaagtcgggcttctgtggccgaacagctcagaggcacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 taaatctgtacgaagcgtcttaagtcgggcttctgtggccgaacagctcagaggcacagg 217
Query: 301 caacagtcacgcagca 316
||||||||||||||||
Sbjct: 216 caacagtcacgcagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_a15.g1 MSMg01no502_a15.g1 CHROMAT_FILE:
MSMg01no502_a15.g1 PHD_FILE: MSMg01no502_a15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:59 2005
(648 letters)
>mm_chr15_12657961_12659009
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 643/649 (99%), Gaps = 1/649 (0%)
Strand = Plus / Plus
Query: 1 cagaagcacaccatgatccaactagtgagaactgtggtgggcggtaccattccacatgag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 cagaagcacaccatgatccaactagtgagaactgtggtgggcggtaccattccacacgag 260
Query: 61 aacagcacataacattcaccctggctccattatgactacccacctgcctgttaacaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagcacataacattcaccctggctccattatgactacccacctgcctgttaacaggaa 320
Query: 121 caatgagcagctcttctttggtaggtgctaaaaataaagggtcctaccaatgagtggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgagcagctcttctttggtaggtgctaaaaataaagggtcctaccaatgagtggcac 380
Query: 181 tttacatgcgcaaccctcaggcaagttctggttaccatagcaaatcccacttccgacagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttacatgcgcaaccctcaggcaagttctggttaccatagcaaatcccacttccgacagc 440
Query: 241 atatgtggagtgcatgatgtatccagtagccagggttctgccttcccacaggaaggcagc 300
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaggtggagtgcatgatgtatccagtagccagggttctgccttcccacaggaaggcagc 500
Query: 301 tatatctgccacaagggctgatcagctgctgtagccttctccatgaggaaagcccaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatatctgccacaagggctgatcagctgctgtagccttctccatgaggaaagcccaacca 560
Query: 361 atacttatgggtcttggatatgcttacaattacaatgactcttcgcctgaa-gagtaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 atacttatgggtcttggatatgcttacaattacaatgactcttcgcctgaaagagtaggg 620
Query: 420 tttcttccccactcccagtgttgatgtttacttactggcatgctgatgtaattttcagga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcttccccactcccagtgttgatgtttacttactggcatgctgatgtaattttcagga 680
Query: 480 ttggccttatttctaaatgaaagtctaaactgagcacagcaggtcaggcctgtcatccta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttggccttatttctaaatgaaagtctaaactgagcacagcaggtcaggcctgtcatccta 740
Query: 540 gcaactcgcaaggctgaggcaacaagcacttgagcctaagagttcaagaccagctttggc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcaactcgcaaggctgaggcaacaagcacttgagcctaagagttcaagaccagctttggc 800
Query: 600 agcaaggcaagactttattaaaggaaggagggaaggagggaaggaagga 648
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 801 agcaaggcaagactctattaaaggaaggagggaaggagggaaggaagga 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
