Query= MSMg01no503_h17.b1 MSMg01no503_h17.b1 CHROMAT_FILE:
MSMg01no503_h17.b1 PHD_FILE: MSMg01no503_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:46 2005
(598 letters)
>mm_chr15_77766505_77767503
Length = 999
Score = 1120 bits (579), Expect = 0.0
Identities = 591/595 (99%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgagctgtccagatggctctgtggataaagatgcctgctgctaagtttgatgc 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgagctggcaagatggctctgtggataaagatgcctgctgctaagtttgatgc 264
Query: 65 tctgagctcagtacctgggactcagctggtaggaggggagaactgactccctcaagttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctgagctcagtacctgggactcagctggtaggaggggagaactgactccctcaagttgt 324
Query: 125 ccttatccccacatctctgctgcggtctgcatgcccatgcacgcaaaataaataataaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccttatccccacatctctgctgcggtctgcatgcccatgcacgcaaaataaataataaaa 384
Query: 185 ggtgaaaaaaaaa-cctacaaaaactccttggaagttggtgagaaaaaagtaaaaaatcc 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgaaaaaaaaaacctacaaaaactccttggaagttggtgagaaaaaagtaaaaaatcc 444
Query: 244 aaggagagaaaacagacaagcataaaaacccagcaccacacaaagggaaaaaaggaagtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggagagaaaacagacaagcataaaaacccagcaccacacaaagggaaaaaaggaagtg 504
Query: 304 gcagccgcttccatcctccgtgtggaagatggtaaagactcggctaccacgatagttagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcagccgcttccatcctccgtgtggaagatggtaaagactcggctaccacgatagttagt 564
Query: 364 cttcttcatcaatttaactcatcatcgaaacaaacgtgtctatgaaagatttaaggaaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcttcatcaatttaactcatcatcgaaacaaacgtgtctatgaaagatttaaggaaga 624
Query: 424 tggaagacctacccagaatgtggtagcagtagcctatgggctgggttcctaaactgaatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggaagacctacccagaatgtggtagcagtagcctatgggctgggttcctaaactgaatg 684
Query: 484 aaaaaggagaaccaggacttagttctatcttattcctaacggaggacacaatgtgacctg 543
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaaaggagaaccagcacttagttctatcttattcctaacggaggacacaatgtgacctg 744
Query: 544 aggcctcatacttttgaggccaccacgccttaaccaccatgactgactgtattct 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aggcctcatacttttgaggccaccacgccttaaccaccatgactgactgtattct 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space: 581532
Effective search space used: 581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_h17.g1 MSMg01no503_h17.g1 CHROMAT_FILE:
MSMg01no503_h17.g1 PHD_FILE: MSMg01no503_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:46 2005
(519 letters)
>mm_chr15_77954547_77955466
Length = 920
Score = 944 bits (488), Expect = 0.0
Identities = 509/516 (98%), Gaps = 1/516 (0%)
Strand = Plus / Minus
Query: 4 ccctctcttgattacttgtgacctttccttctggccttt-ggaggtcttctgagcccctc 62
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 516 ccctctcttgattacttgtgacctttccttctggcctttggggggtcttctgagcccctc 457
Query: 63 taggatgggtctatatgctgactaccctgagcatgcgtgtcttttcctttttctttttcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 taggatgggtctatatgctgactaccctgagcatgcgtgtcttttcctttttctttttcc 397
Query: 123 actcagcaaacccatattgcagacctagtatgtgccaggcaacctggatatcaggctgaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actcagcaaacccatattgcagacctagtatgtgccaggcaacctggatatcaggctgaa 337
Query: 183 ataccaaatacaaaatggagtgtcacgtgagtctgtgctgactctgccacttgtcaagct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ataccaaatacaaaatggagtgtcacgtgagtctgtgctgactctgccacttgtcaagct 277
Query: 243 tttagtatttaatctcatcagtgtctctatcccctcagcatattgtctgagccaattggc 302
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttgagtatttaatctcatcagtgtctctatcccctcagcatattgtctgagccaattggc 217
Query: 303 aaaggaattccttttcattgtgtacctactatgtgctaggccgtgcgccgtaggttggaa 362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 216 aaaggaattccttttcattgtgtacctactatgtgctaggctgtgcgccgtaggttggaa 157
Query: 363 atacagcgtgaacaaggtggataaaatcgctgccttcctgagatttgcattctgctggga 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atacagcgtgaacatggtggataaaatcgctgccttcctgagatttgcattctgctggga 97
Query: 423 atagaatggaatcaaatgaatgatttgcatccctaattaattaattagcatgcagagaag 482
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 96 atagaatggaatcaaatgaatgatttgcatccctaattaattaattaacatgcagagaag 37
Query: 483 agagagaaagagggtgtggagcatagaggtctcaga 518
||||||||||||||||||||||| ||||||||||||
Sbjct: 36 agagagaaagagggtgtggagcagagaggtctcaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
