Query= MSMg01no505_b14.b1 MSMg01no505_b14.b1 CHROMAT_FILE:
MSMg01no505_b14.b1 PHD_FILE: MSMg01no505_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:56 2005
(417 letters)
>mm_chr15_92793276_92794097
Length = 822
Score = 681 bits (352), Expect = 0.0
Identities = 401/420 (95%), Gaps = 7/420 (1%)
Strand = Plus / Minus
Query: 4 cacggctgtcctagtcctggggttggcaggtgggtaccagacaccagataagatataaga 63
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 622 cacggctgtcctagtcctggggttggcaggagggtaccagacacctgataagatataaga 563
Query: 64 tagggcctgcacattttctgttttccccatttgctctcaggctgtgttctgtgccatgca 123
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||
Sbjct: 562 tagggcctgcacattttctgttttccccatttgctctcagactgtgttctgcgccaggca 503
Query: 124 tgtactgctaaaatggctcaaatcagaacttccatattcatttggacccttatctttggg 183
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 502 tgtactgctaaaatggctcaaatcagaacttccatattcatgtggaccattatctttggg 443
Query: 184 cttgcaacctctctgcacatatctctgagggcgacagtactttactgaagtctgtctcat 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 442 cttgcaacctctctgcacatatctctgagggcgacagtactttcctgaagtctgtgtcat 383
Query: 244 cttttcatcccaggtccatatcctggggggctttagcattctttatgatccacctagtaa 303
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 382 cttttcatcccaggtccatatcct-gggggcttcagcattctttatgatccacctagtaa 324
Query: 304 ctgagtctctcaatagcttcacgt-gatttcctctaagatg-----ttctttgtatatta 357
|||||||||||||||||||||| | | |||||||||||||| ||||||||||||||
Sbjct: 323 ctgagtctctcaatagcttcacatgggtttcctctaagatgttcgcttctttgtatatta 264
Query: 358 tgaattactttaatcacaagtgatgattgtgaattctcaacttttcttatactgctttca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgaattactttaatcacaagtgatgattgtgaattctcaacttttcttatactgctttca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 822
Length adjustment: 9
Effective length of query: 408
Effective length of database: 813
Effective search space: 331704
Effective search space used: 331704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_b14.g1 MSMg01no505_b14.g1 CHROMAT_FILE:
MSMg01no505_b14.g1 PHD_FILE: MSMg01no505_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:56 2005
(319 letters)
>mm_chr15_92624287_92625005
Length = 719
Score = 601 bits (311), Expect = e-176
Identities = 317/319 (99%)
Strand = Plus / Plus
Query: 1 accttcaaccagtgtttttggttttgtccaatctaatctactttatccagcttatatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttcaaccagtgtttttggttttgtccaatctaatctactttatccagcttatatttg 260
Query: 61 aagcttacactgaaatgcacatggtaagagatcagatcttaaaccttccatctttttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcttacactgaaatgcacatggtaagagatcagatcttaaaccttccatctttttact 320
Query: 121 tgtcataagtttgttgtactttttctaagttccatattcgttactcctatgccttcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcataagtttgttgtactttttctaagttccatattcgttactcctatgccttcattg 380
Query: 181 gaataacttaatattttctctgttttgttctctgtgtcctatgtctgtatttgctaaatg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gaataacttaatattttctctgttttgttctctgtgtcctatgtctgtatttgctacatg 440
Query: 241 cttccttatgatctttgtggttatgacgtgcattcttaacttagaaaggtctaaaataac 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttccttatgatccttgtggttatgacgtgcattcttaacttagaaaggtctaaaataac 500
Query: 301 ttcttgcttcctatcagct 319
|||||||||||||||||||
Sbjct: 501 ttcttgcttcctatcagct 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
