NNNAAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXATCTAAGAGAGG
ATCCGCGGAATTCGGTTTTCTCTCCTAGGCCCCACAGTGACATAGCGTTA
CCCTTTTGCATGACTCATAGGTACCTATTTTAAGAAAACCATGTTTCTGG
TAGAGACAGAAGCTCGGATTCCGTAAACTCACCATAATGCAGCAGAAACT
GAGAATATCAGAAGTCAAAATATTCTACTAACCAGGCTGGTAGAGCTGTG
AACACACTCATGAGTAGATTCCTCGTGTGCTGAGATGGGGCACCTTTCTC
CTATAGCAACCTGTTTTAACACTCCTCTGTTAATAGGAAAGACCAACTAC
TTTTTCTCTGACACTCACTCCATCCTTAGGCTTTTACCCCTGAAACCAGG
TATGTGAAAATTTCTCCCCATCAAACAATTCTCAGATGCTAACTGATAGC
CTGCAATTTAGCCTGGTTCTGACACTAGACATGGTCTTCAAGGAGAAGAG
GAGCCCAGTCCCGAGGCTTTTTTTTTTTTTTAATTTCCAATACCAATCAC
AGCTAAGGTAATAAACTGTGCTTTAGACCAACCAGCCACAAATCAGAGGT
GCCCGTGGTTCCTCCACACTCTTTGGGTTTTGTCTTATTCAATGTCCTAC
ATGGCTTTCAAGGAAGTGCTGACTTTTCTTCATGGCTTTGTAATAAAGAC
TACACAGGGCCACAGATGAGCAGCCAGGTACA

NTTTTCGCAATGATGTGGGTGGCCTGGNNGGCCGCCTTCCAAAAACTTTA
GGTGACACTATATTTGCCTACAAGGAATTCTTAAGCCTTTTCTTTTCTTT
TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCCTT
TCCTTTCCTTTTCTTTTCCATTTCTTTGTTTCTCTTTCTTTCTTTTGATC
TTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
TTTCTTTCTCTTTCTTTCTTTTTTTCTACCTATCTTTCTTTCTTCTCTGA
CCCAGTAATCATCTACTAGAGTTCAATTCCCATGAGTTTTTATGTTTTCT
GTTGTTTTTGTTGTTGAAATCCAGCTTTAATCTATGGTGGACTGATAGTT
ACAAGGAATTATTTCAATTTTCTTCTATCTGTTGAGGCTTGCTTTGTGAC
AACAATATTATCAATTTTGGAGAAGTGCTGAGATGAAGGTAGATGAAGGT
ATGCTCTTTTGCATTTGGGTAAAAGTTTTGTAGATGTATGTTAGGTTCAT
TTGATTCATAAGTCTGGTTAGTTTCATTAATTCTCTGTTTAGTTTCTGTC
TGGACGACCTGTCCATTGTTGAGAGTGGGTTGTTGAAGTGTCCCTCTATT
AATGTGTGGGGTTTGATTTGTGATTTAAGCTTTAGTAN

Query= MSMg01no505_f11.b1 MSMg01no505_f11.b1 CHROMAT_FILE:
MSMg01no505_f11.b1 PHD_FILE: MSMg01no505_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:14 2005
         (636 letters)



>mm_chr15_60379148_60380187
          Length = 1040

 Score = 1199 bits (620), Expect = 0.0
 Identities = 634/640 (99%), Gaps = 4/640 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcctaggccccacagtgacatagcgttacccttttgcatgactcataggtacctatttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctcctaggccccacagtgacatagcgttacccttttgcatgactcataggtacctatttt 606

                                                                       
Query: 61  aagaaaaccatgtttctggtagagacagaagctcggattccgtaaactcaccataatgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aagaaaaccatgtttctggtagagacagaagctcggattccgtaaactcaccataatgca 546

                                                                       
Query: 121 gcagaaactgagaatatcagaagtcaaaatattctactaaccaggctggtagagctgtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcagaaactgagaatatcagaagtcaaaatattctactaaccaggctggtagagctgtga 486

                                                                       
Query: 181 acacactcatgagtagattcctcgtgtgctgagatggggcacctttctcctatagcaacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acacactcatgagtagattcctcgtgtgctgagatggggcacctttctcctatagcaacc 426

                                                                       
Query: 241 tgttttaacactc---ctctgttaataggaaagaccaactactttttctctgacactcac 297
           |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 425 tgttttaacactccttctctgttaataggaaagaccaactactttttctccgacactcac 366

                                                                       
Query: 298 tccatccttaggcttttacccctgaaaccaggtatgtgaaaatttctccccatcaaacaa 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tccatccttaggcttttacccctgaaaccaggtatgtgaaaatttctccccatcaaacaa 306

                                                                       
Query: 358 ttctcagatgctaactgatagcctgcaatttagcctggttctgacactagacatggtctt 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 305 ttctcagatgctaactgatagcctgcaatttagcctggttctgacactagacacggtctt 246

                                                                       
Query: 418 caaggagaagaggagcccagtcccgaggct-tttttttttttttaatttccaataccaat 476
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 245 caaggagaagaggagcccagtcccgaggctatttttttttttttaatttccaataccaat 186

                                                                       
Query: 477 cacagctaaggtaataaactgtgctttagaccaaccagccacaaatcagaggtgcccgtg 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cacagctaaggtaataaactgtgctttagaccaaccagccacaaatcagaggtgcccgtg 126

                                                                       
Query: 537 gttcctccacactctttgggttttgtcttattcaatgtcctacatggctttcaaggaagt 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gttcctccacactctttgggttttgtcttattcaatgtcctacatggctttcaaggaagt 66

                                                   
Query: 597 gctgacttttcttcatggctttgtaataaagactacacag 636
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  gctgacttttcttcatggctttgtaataaagactacacag 26


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1040
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1030
Effective search space:   644780
Effective search space used:   644780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)