Query= MSMg01no505_n21.b1 MSMg01no505_n21.b1 CHROMAT_FILE:
MSMg01no505_n21.b1 PHD_FILE: MSMg01no505_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:52 2005
(642 letters)
>mm_chr15_91988721_91989763
Length = 1043
Score = 1058 bits (547), Expect = 0.0
Identities = 601/619 (97%), Gaps = 1/619 (0%)
Strand = Plus / Minus
Query: 9 tgaatgaaagtgagtgcagagagaggactacaacactcccagggtaaaacaaagtttgag 68
|||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 619 tgaatgaaagagagtgcagagaggggactacaacacccccagggtaaaacaaagcttgag 560
Query: 69 gctgtaataaagacccagtgtcccttctcctgaagtctggctattccttgaggagggtgg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gctgtaataaagacccagtgtcccttctcctgaagtctggctattccttgaggagggtgg 500
Query: 129 agggggtgacgcttaaccaatcattccagaaggatggaaaagagacatggtcatttcagg 188
||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aggggatgacatttaaccaatcattccagaaggatggaaaagagacatggtcatttcagg 440
Query: 189 taatttgatcgcctggcagatcaaaggactttcccacattttgaatttactatacctgca 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taatttgatcgcctggcagatcaaaggactttcccacattttgaatttactatacctgca 380
Query: 249 caatgtataataaattctgcaaaggacaacaaaataaatttaaaaattgggaataaatca 308
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 379 caatgtaaaataaattctgcaaaggacaacaaaataaatttaaaaattaggaataaacca 320
Query: 309 aggcacgtgttagattgtcaaatctgtgatatgtattaagatgtataactaattttaact 368
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 319 aggcacgtgttagattgtcaaatctgtgatatgtattaagatgtataactgatcttaact 260
Query: 369 cctataattttaaacaatgtatggtg-tttttgaataacccagaaatagtcaaataatta 427
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 259 cctataattttaaacaatgtatggtgttttttgaataacccagaaatagtcaaataatta 200
Query: 428 ataataatatcataatatattcgaggaagaattcattgtttttaagacaaggggcacgaa 487
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct: 199 ataataatatcataatatattggaggaagaattcattgtttttaagacaaggagcatgaa 140
Query: 488 atatatggaggatattgtgcatcctgcaattgaaaacagttcttctatttgttttaccaa 547
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 139 ctatatggaggatattgtgcatcttgcaattgaaaacagttcttctatttgttttaccaa 80
Query: 548 tatcacagaaacactcttgctctcatccctctgattattttaaaaagtatttgtgcaaca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tatcacagaaacactcttgctctcatccctctgattattttaaaaagtatttgtgcaaca 20
Query: 608 tctacatgccagaaaagtt 626
|||||||||||||||||||
Sbjct: 19 tctacatgccagaaaagtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_n21.g1 MSMg01no505_n21.g1 CHROMAT_FILE:
MSMg01no505_n21.g1 PHD_FILE: MSMg01no505_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:52 2005
(596 letters)
>mm_chr15_91790085_91791080
Length = 996
Score = 934 bits (483), Expect = 0.0
Identities = 569/599 (94%), Gaps = 6/599 (1%)
Strand = Plus / Plus
Query: 1 ttcactagctgaagcacagcaggggaatgaaagaataaggagaactctcgcccagattca 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcactagctggagcacagcaggggaatgaaagaataaggagaactctcgcccagattca 260
Query: 61 cccccaggattcctaggggaaccatggaagctggcagaaccgtcatagggaaaacagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccccaggattcctaggggaaccatggaagctggcagaaccgtcatagggaaaacagtct 320
Query: 121 ttgaatccacaaaagaagacaacctcattagatgccataagcagtacaaacccctagtgt 180
|||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||
Sbjct: 321 ttgaatccacaaaagaagacaacctcataagatgccgtaagcagtacaagcacctagtgt 380
Query: 181 ccctaatggataccatctctccagtacacactactgtttttaagagtcacagctacattc 240
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgtaatggatactgtctctccagtacacactactgtttttaagagtcacagctacattc 440
Query: 241 ttgttttaaaggtaaaataatgctttcagacctatattccca--ctccgaacttgccaag 298
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct: 441 ttgttttaaaggtaaaataatgctttcagacctatattcccatgct--gtacttgccaag 498
Query: 299 attacctctctttgggtgttaatctctattttctcaatgtgtgtcatcttctgtgtgacc 358
||||||||| ||||||||||||| |||||| |||||||||||| ||||||||||||||||
Sbjct: 499 attacctctttttgggtgttaatttctattctctcaatgtgtggcatcttctgtgtgacc 558
Query: 359 ctaagtataatatgatgtcattttcatagacctcagctttacagaattagttttg-cacc 417
||| | |||| |||| |||||||||| |||||||||||||||||||||||||||| | ||
Sbjct: 559 ctatgaataacatgacgtcattttcacagacctcagctttacagaattagttttgtc-cc 617
Query: 418 agcctctttctagtaagaatgtggtggctatctctagtgcttaaaacaacccaggacaca 477
|| |||| ||| || |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 618 agtctctctctggtgagaatgtggtggctatctctggtgcttaaaacaacccaggacaca 677
Query: 478 taactggcttttgtccctgtcaaaatttttcatctttaacaggtatattaggtatgatat 537
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 678 taactggcttttgtccctgtcaaaattttttatctttaacaggtatattaggtatgatat 737
Query: 538 gatatgaaggctctgaaaatgccattttaagagagatatgctgaaagggatatgctgaa 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gatatgaaggctctgaaaatgccattttaagagagatatgctgaaagggatatgctgaa 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
