Query= MSMg01no506_f24.b1 MSMg01no506_f24.b1 CHROMAT_FILE:
MSMg01no506_f24.b1 PHD_FILE: MSMg01no506_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:33 2005
(673 letters)
>mm_chr15_78174299_78175371
Length = 1073
Score = 1263 bits (653), Expect = 0.0
Identities = 667/673 (99%), Gaps = 4/673 (0%)
Strand = Plus / Plus
Query: 3 ggaattcacctagcagttccc--gctgacctgacacccgtgtacatagtcctgactgtct 60
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcacctagcaga--ccaggctgacctgacacccgtgtacatagtcctgactgtct 260
Query: 61 cctaagtgctagaactaaagtcatgagccataatgctcacatcttgaaccacaacccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctaagtgctagaactaaagtcatgagccataatgctcacatcttgaaccacaacccaaa 320
Query: 121 aacaaagtacaaataaaagccccagccccatgacccactggcacatttcctccaataaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaaagtacaaataaaagccccagccccatgacccactggcacatttcctccaataaga 380
Query: 181 ccacacctccgcaaccttcccaaacagtcccaactggggaccagaccaaggactcaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacacctccgcaaccttcccaaacagtcccaactggggaccagaccaaggactcaaaca 440
Query: 241 cataagcctatgggaccattctcattcaaacaaccacagagttcaaaacagtcagaatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataagcctatgggaccattctcattcaaacaaccacagagttcaaaacagtcagaatgg 500
Query: 301 ctggggttagggatattggaccagcgtggagaattcattagacaagcttggataatgggg 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggggttagggatattggaccagcttggagaattcattagacaagcttggataatgggg 560
Query: 361 aacatcctgctgggggaagggcatgatggcattccctgaaatgatcctccctctagtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacatcctgctgggggaagggcatgatggcattccctgaaatgatcctccctctagtcca 620
Query: 421 gatggagcctccaaccctcaacctgaccaagaacagagacagctacagcctgcattggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatggagcctccaaccctcaacctgaccaagaacagagacagctacagcctgcattggga 680
Query: 481 aactcagaagatggcttactcattcattgagcacacattccaggtccagtacaagaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactcagaagatggcttactcattcattgagcacacattccaggtccagtacaagaagaa 740
Query: 541 atcggacagctgggaggtgagttccaggacccaggggatgttacagacagggagtagagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atcggacagctgggaggtgagttccaggacccaggggatgttacagacagggagtagagg 800
Query: 601 aaagaaaggacattctagggagccctacttgcaaaggggatgacccctgtaccttggcac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaagaaaggacattctagggagccctacttgcaaaggggatgacccctgtaccttggcac 860
Query: 661 ccacatggtcaac 673
|||||||||||||
Sbjct: 861 ccacatggtcaac 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_f24.g1 MSMg01no506_f24.g1 CHROMAT_FILE:
MSMg01no506_f24.g1 PHD_FILE: MSMg01no506_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:33 2005
(373 letters)
>mm_chr15_78324402_78325179
Length = 778
Score = 690 bits (357), Expect = 0.0
Identities = 367/373 (98%), Gaps = 5/373 (1%)
Strand = Plus / Minus
Query: 1 tccttagtgagaaagagagaaggaatctccctctgggacctggctgtccagtcagctatg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 539 tccttagtgagaaagagagaaggaatctccccctgggacctggctgtccagtcagctatg 480
Query: 61 ttgattgacaggtttctgagggccctaggctggaggtcagaggtagagttctagcttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttgattgacaggtttctgagggccctaggctggaggtcagaggtagagttctagcttaga 420
Query: 121 tttgtctctgacattaccgagtggctagagaggttaaggacatcgccaggcatggggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tttgtctctgacattaccgagtggctagagaggttaaggacatcgccaggcatggggctc 360
Query: 181 cgtctccgaggctgcctgaggtaggagcttcccaccgttagctgtgtttacagtacttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cgtctccgaggctgcctgaggtaggagcttcccaccgttagctgtgtttacagtacttca 300
Query: 241 gggccaaggtgggtggctgaggaaggcagaactacctttgaaggtcccctttctttcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gggccaaggtgggtggctgaggaaggcagaactacctttgaaggtcccctttctttcaca 240
Query: 301 cactcctcag-----ctgaacagcaagaggtgaacagtggtgtgtgtgtgtgtgtgtgtg 355
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cactcctcagctgaactgaacagcaagaggtgaacagtggtgtgtgtgtgtgtgtgtgtg 180
Query: 356 tgtgtgtgtgtgt 368
|||||||||||||
Sbjct: 179 tgtgtgtgtgtgt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 778
Length adjustment: 9
Effective length of query: 364
Effective length of database: 769
Effective search space: 279916
Effective search space used: 279916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
