Query= MSMg01no506_g12.b1 MSMg01no506_g12.b1 CHROMAT_FILE:
MSMg01no506_g12.b1 PHD_FILE: MSMg01no506_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:36 2005
(367 letters)
>mm_chr15_51463193_51463959
Length = 767
Score = 611 bits (316), Expect = e-179
Identities = 355/372 (95%), Gaps = 9/372 (2%)
Strand = Plus / Plus
Query: 1 attttctttattcatgcatcctgaaccaattgatacctttaactccaatttctctgctcc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 200 attttctttattcatgcatcctgaaccaattgatacctttaaccccaatttctctgctcc 259
Query: 61 cgttgtcatttaaattcctgccagtcactttctggcccattaccaacggggccttcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cgttgtcatttaaattcctgccagtcactttctggcccattaccaacggggccttcttgc 319
Query: 121 aagggctgtttccaacgtgcatttacaaggtgctttaacataactggttgtaagagatgg 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 320 aagggctgtttccaacgtgcatttacaaggtgctttaatgtaactggttgtaagagatgg 379
Query: 181 cgagtaatccctctaagtgtttaagcagcagccgattgctccttccctgcacatgctgac 240
|||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 cgaggaatccctctaagtatttaagcagcagcggattgctccttccctgcacatgctgac 439
Query: 241 acattcacacatttgttactgtta--a---gccagctttcttgtgctagctgaggaaaaa 295
||||||||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 440 acattcacacatttgttac----accacgggccagctttcttgtgctagctgaggaaaaa 495
Query: 296 ttgcaaggtagggcctttgtaattaaatcactgtcctaccataacaatgaacgagaacat 355
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 496 ttgcaaggtagggcctttgtaattaaatcgctgtcctaccataacaatgaacgagaacgt 555
Query: 356 tgtggaatctca 367
||||||||||||
Sbjct: 556 tgtggaatctca 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_g12.g1 MSMg01no506_g12.g1 CHROMAT_FILE:
MSMg01no506_g12.g1 PHD_FILE: MSMg01no506_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:36 2005
(420 letters)
>mm_chr15_51592519_51593338
Length = 820
Score = 774 bits (400), Expect = 0.0
Identities = 413/418 (98%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 1 ccatacccatacaagagaggaactgctagttggaatgtgagagacatccacaaagctgtt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 515 ccatacccatacaagagaggaactgctagttggaacgtgagagacatccacaaagctgtt 456
Query: 61 tccattctttctctgcttcctcccacatgagctgagagttttcaaagaaaaaaaactcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tccattctttctctgcttcctcccacatgagctgagagttttcaaagaaaaaaaactcta 396
Query: 121 cataatagtctttatattagagagggttaagaatgagagtgtccttgtcagctatatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cataatagtctttatattagagagggttaagaatgagagtgtccttgtcagctatatggc 336
Query: 181 ttgggatttactatgcaagttttatcatttctgttacagtgaagagaagcatgggagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttgggatttactatgcaagttttatcatttctgttacagtgaagagaagcatgggagctt 276
Query: 241 cgtgttgtacagctagcctacctcagaagccctacttcatggaattacaaggggtttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cgtgttgtacagctagcctacctcagaagccctacttcatggaattacaaggggtttgat 216
Query: 301 ttacactttgaacgaatctgtctttctgtttatctatctatctatctatctatctatcta 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 215 ttacactttgaacgaatctgtctttctgcttatctatctatctatctatctatctatcta 156
Query: 361 tctatctatcta--tctatctatctatctatctatctaatctatctatctatctatca 416
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 155 tctatctatctatctctatctatctatctatctatct-atctatctatctatctatca 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 88
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
