Query= MSMg01no507_c06.b1 MSMg01no507_c06.b1 CHROMAT_FILE:
MSMg01no507_c06.b1 PHD_FILE: MSMg01no507_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:34 2005
(696 letters)
>mm_chr15_26784345_26785440
Length = 1096
Score = 663 bits (343), Expect = 0.0
Identities = 432/473 (91%), Gaps = 19/473 (4%)
Strand = Plus / Minus
Query: 243 cagaaaattggacatagtactaccggaggatccatctatacctctcctgggcatatatcc 302
|||||||||||||||||||||||| || |||||| | |||| ||||||||||||||| ||
Sbjct: 806 cagaaaattggacatagtactaccagaagatccagcaatacttctcctgggcatataccc 747
Query: 303 agaagatgccccaaccggtaagaaggacacatgctccactatgttcatagcagccttact 362
|||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| |
Sbjct: 746 agaagatgttccaacctgtaataaggacacgtgctccactatgttcatagcagccttatt 687
Query: 363 tataacagccacatatgtcttaagaaccaagacattttcatacaaactcaaactcgtgta 422
||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 686 tataatagccacatatgtcttaagaaccaagacattttcgtacaaaatcaaactcgtgta 627
Query: 423 tgtactcagtactacttgagacccagtactgcttgagacccag----------------- 465
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgtactcagtactacttgagacccagtactgcttgagacccagtactgcttgagacccag 567
Query: 466 gactgcttgatacattaaagaagacttgttttcatcccatatgtagccacttttatcagt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gactgcttgatacattaaagaagacttgttttcatcccatatgtagccacttttatcagt 507
Query: 526 ctctgaattactttttt--ctttgttcctttttcccattcttttcttcattgttttctct 583
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctctgaattacttttttttctttgttcctttttcccattcttttcttcattgttttctct 447
Query: 584 gcttcttaaatcaaaacctgagtgtggtcttttctttcttaaacagaaggcagaatatta 643
||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 446 gcttcctaaattgaaacccgagtgtggtcttttctttcttaaacagaaggcagaatgtta 387
Query: 644 ctgctaccctttaagagcaggattgccctctgtcctttgtttaacactgtgtt 696
|||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 386 ctgccaccctttaagagcagggttgccctctgtcctttgtttaacactgtgtt 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_c06.g1 MSMg01no507_c06.g1 CHROMAT_FILE:
MSMg01no507_c06.g1 PHD_FILE: MSMg01no507_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:34 2005
(649 letters)
>mm_chr15_26628768_26629817
Length = 1050
Score = 1164 bits (602), Expect = 0.0
Identities = 644/666 (96%), Gaps = 17/666 (2%)
Strand = Plus / Plus
Query: 1 ctcttccatacctgcttggtgagtcaaggcatacatcacccaggcaagcaactggagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ctcttccatacctgcttggtgagtcaaggcatacatcacccaggcaagcaactggagcat 244
Query: 61 cccaagaggcaaacattacctacaaaatcacaactcttgggaaacacttatatgtttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cccaagaggcaaacattacctacaaaatcacaactcttgggaaacacttatatgtttacc 304
Query: 121 aaggtattaaaatgtatgcagtcctctgcagcagattttttttttgagactgaattattt 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agggtattaaaatgtatgcagtcctctgcagcagattttttttttgagactgaattattt 364
Query: 181 catgtaagaagattctgtacctatattctgtgtaagactttgaaagtaataaatatttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 catgtaagaagattctgtacctatattctgtgtaagactttgaaagtaataaatatttac 424
Query: 241 tcgtctcactatttggctaaccaaggctaattagtcagttccagacaagtgggagataag 300
|| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 425 tcatctcactatctggctaaccaaagctaattagtcagttccagacaagtgggagataag 484
Query: 301 tagatgatgtgtgtgcacacacacatcagagagagagagagagagag--agagaga-a-- 355
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 485 tagatgatgtgtgtgcacacacacatcagagagagagagagagagaggcagagagagaga 544
Query: 356 -agagagagagagagagagagagagagagagagagagaa----------aaggagagaga 404
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 545 gagagagagagagagagagagagagagagagagagagaaggagagagagaaggagagaga 604
Query: 405 taagctagaaaatagttatcaaatatcatacatgagtatgataagctctaaacaaactat 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 taagctagaaaatagttatcaaatatcatacatgagtatgataagctctaaacaaactat 664
Query: 465 atcttagtttgtgaatatggaggactatgattgaggatatatgtaaagtcttctaaatat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atcttagtttgtgaatatggaggactatgattgaggatatatgtaaagtcttctaaatat 724
Query: 525 caagactttatggaccattagtgaa-ctgcaaatatagtgcaagggattaggggaaacag 583
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 725 caagactttatggaccattagtgaaactgcaaatatagtgcaagggattaggggaaacag 784
Query: 584 aaaagaacaacatagtgaaagaagcttgatgtggagtgagggaaattgagtctgagctgc 643
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 785 aaaagaacaacatagtgaaagaggcttgatgtggagtgagggaaattgagtctgagctgc 844
Query: 644 taagtc 649
||||||
Sbjct: 845 taagtc 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 79
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
