AAAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTCATGGTCTCTATTCAGTTCCTGCTTCCAAGTTTCC
TTCAGTGGTAGATTATAAAATGTGAGATGAATGATGAATGTGGTGGTTTG
AATACATTTGGCCCAGGGAGTAGCACTCTTTGAAAGTGTGGCCTTGTTGG
AGTAGGTGTGGCCTTGTGGGAGAAAGTATGTCACTGTAGGCATGAGCTTT
AAGACCTTCATCCTAGCTACCTGGAAGCCAGTTTTCTGTCTGTCTTTGGA
TAAAGATGTAGAACCCTCTGCTCCACCAGCCCTACATCTTCCTGGATGCT
GCAATGCTTCTTGCTATGATGATAATGGACTAAAACCCCTGAAACTGTAA
GCCTGCCCCATTAAAATGTTTGCCTTTATAAGAATTTCCTTGGTCATGGT
GTCTCATCACAGCAATAAAACCCAAACTAAGACAATGCAATCAACCAATT
ACTCTCTCAAGATGTTTTTGATCAGCATTTTTTTCCACAATAACAAAACA
CAAATTAGGATACATGGGGAACCATAAGTAGTTCTGTTTCTTGGAGTAGA
GAGTATGGAAATGAGTAGTAGTGAAAGGAACTGTGCATGAAAATGGGAAT
CATAAGCGGGTACAATGACAACATTTTCTTTCTCAAATTAACAGACCAAG
TATGAAACTTGGTTTGGCCAAGGAAAAAAATTAACAATATAATGCAAAAG
ATTCTN

NNCCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCAGAAATAAGAA
TGGGTAGGTTGGGGATCAGGGGGAGGGGCAGGGGACAGGGGATTTTTGGA
GGGGAAACTAGGAAAGGAGATAATATTTGAAATGTAAATAAAGAAAATAT
CTAAAAAAAAAGATTTTGAATGTGGACCTTGAATACTTGAAATTACATTA
GTTATAATTCAGATAATCTGTACACTATTAAAAATTCATATAGTTAACAA
AAGAAAAAGAACTCGCAGTACAATGGACAATATTTTTTTGACTGTTTGAT
TATTTAATGCTTTTCTTTTAGTGTTCTTGAAAATTATAGATAATATTTTC
CTCCATCCCGTGGCCTTCTCTTACAATAAATTGTCCATTTTCTCTGCTGT
AAAAAAAAAATGTGTCACCAGATGTACCTACTTTAGCTCTTCATGTTTTT
GCCTTTCTCCTCTTTGTCACACCACTACATAGCCTGACTATACCACTTTC
ATTTCATGGAATTACGGAGTGTTTAATATTACTGTATTTAAAATGGACTT
ATTTTACCCATTTTAGTGTTCAAAATTTTTTATAATAAAAAATAACTTTA
ATAAAAAAACCTCAACAAACACTTGTGACTTACAATTGTAATATTTCCCT
TATCTTTATTTCCTCTCTATGCCACATTATAATTTTTTTAAACCATAAAC
AGCGGCCTTATTAATATATTTTTTTTN

Query= MSMg01no508_i01.b1 MSMg01no508_i01.b1 CHROMAT_FILE:
MSMg01no508_i01.b1 PHD_FILE: MSMg01no508_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:25 2005
         (590 letters)



>mm_chr15_60688124_60689113
          Length = 990

 Score = 1131 bits (585), Expect = 0.0
 Identities = 588/589 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagttcctgcttccaagtttccttcagtggtagattataaaatgtgagatgaatgatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagttcctgcttccaagtttccttcagtggtagattataaaatgtgagatgaatgatgaa 260

                                                                       
Query: 61  tgtggtggtttgaatacatttggcccagggagtagcactctttgaaagtgtggccttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtggtttgaatacatttggcccagggagtagcactctttgaaagtgtggccttgtt 320

                                                                       
Query: 121 ggagtaggtgtggccttgtgggagaaagtatgtcactgtaggcatgagctttaagacctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagtaggtgtggccttgtgggagaaagtatgtcactgtaggcatgagctttaagacctt 380

                                                                       
Query: 181 catcctagctacctggaagccagttttctgtctgtctttggataaagatgtagaaccctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcctagctacctggaagccagttttctgtctgtctttggataaagatgtagaaccctc 440

                                                                       
Query: 241 tgctccaccagccctacatcttcctggatgctgcaatgcttcttgctatgatgataatgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctccaccagccctacatcttcctggatgctgcaatgcttcttgctatgatgataatgg 500

                                                                       
Query: 301 actaaaacccctgaaactgtaagcctgccccattaaaatgtttgcctttataagaatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actaaaacccctgaaactgtaagcctgccccattaaaatgtttgcctttataagaatttc 560

                                                                       
Query: 361 cttggtcatggtgtctcatcacagcaataaaacccaaactaagacaatgcaatcaaccaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttggtcatggtgtctcatcacagcaataaaacccaaactaagacaatgcaatcaaccaa 620

                                                                       
Query: 421 ttactctctcaagatgtttttgatcagcatttttttccacaataacaaaacacaaattag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttactctctcaagatgtttttgatcagcatttttttccacaataacaaaacacaaattag 680

                                                                       
Query: 481 gatacatggggaaccataagtagttctgtttcttggagtagagagtatggaaatgagtag 540
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacacatggggaaccataagtagttctgtttcttggagtagagagtatggaaatgagtag 740

                                                            
Query: 541 tagtgaaaggaactgtgcatgaaaatgggaatcataagcgggtacaatg 589
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagtgaaaggaactgtgcatgaaaatgggaatcataagcgggtacaatg 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)