NNACTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTAAGTTCCAGATTAGAATAAAATAGTCCTGATAAGTTTGA
GGATTTTCATTTATAAATCAAGTCTGCTTGTTTCAAAATCTTTTTCTTTT
TCGTCTTGGGTCTACCAAGGCACAGATGTGATTTGAAAATAGCACACAGT
AGTATTTTGTTTAAGATTGTACTGTTGATATATTTTAAGATTTCTTTAGG
TAAAAAGTGATATGGCAGATTTCCCTTCAAATTAATTTACATTTTAACAT
AATATTTCAATGTGCGAAGAACACTCAATCATGACATAATTCATTCATGA
TTTAGATAGTACAAATATTTAAAACATTTTATTGAAAATAAATACATATT
GTTATGGTTTGAATATACTAGACCAGGTAGTGGCACTATTAGAAGGTGTG
GCTCTGTTGGAGTAGATGTGTCACTGTGGGTGTGGGCTCTAAGACCCTTA
TTCTAGCTGCCTGAAAGCCAGTATTCTGCTAGCAGCCTTCAGATGAGGAT
GTAAAACTCTCAGTTCCTTGTACCATGCCTGTCTGGATGGTGCCATGTTC
CTGTCTTGATGATAATGGATTGAACCTCTGAATCTCTAAGCCACCGCTAA
TTAAATGTTGTCCTTTACAAGACTTGCCTAGGTCATGGTGTCTGTTCATA
GCAGTAAAACCCTAACTAAGGTACTTACTAATAATGATTTTTAGCAACAT
TTACATCAC

NNNTTCGAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAACTTTT
ATCATGAATGGATCTGTAGGCTTCTTGTATGTTCATGGGCATCTCTTTCT
TTAGGTTTGGGAAGTTTTCTTCTATAATTTTGTTGAAGATATTTGCTGGT
CCTTTGAGTTGAAAATCTTCATTCTCATCTACTCCTATTTTCCATAGGTT
TGGTCTTCTCATTGTGTCCTGGATTTCCTGGATGTTTTGAGTTAGGATCT
TTTTGTGTTTTGTATTTTCTTTGATTGTTGTGCTGATGTTCTCTATGGAA
TCTTCTGCACCTCAGATTCTCTCTTCCATCTCTTGTATTCTGTTGCTGAT
GCTCTCATCTATGGTTCCAGATTTCTTTCCTAGAGTTTCTATCTCCAGCG
TTTCCACACTTTGGGTATTCTTTATTGTGTCTACTTCCCTTTTTAGGTCT
TGGATGACTTTATTCAATTCCATTGCCTATTTGGTTGTGTTTTCCTGCAA
TTCTTTAAGGGATTTTTGTGCTTCCTCTTTAAGATCTTCTACCAGTTTAG
CAGTGTTCTCCTGTATTTCTTTGAGTGAGTTATTAAGGTCCTTCTTGATG
TCCTCTACCACCATCATGAGATATTCTTTTAGATCCAGGTCTAGCTTTTC
AGGTGTGTTGGGGTGCCCTGGACTGGGCAAGGTGGGAGTGCTGGGTTCTG
GTGATGAN

Query= MSMg01no509_b05.b1 MSMg01no509_b05.b1 CHROMAT_FILE:
MSMg01no509_b05.b1 PHD_FILE: MSMg01no509_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:12 2005
         (669 letters)



>mm_chr15_50055592_50056662
          Length = 1071

 Score = 1058 bits (547), Expect = 0.0
 Identities = 633/671 (94%), Gaps = 18/671 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaataaaatagtcctgataagtttgaggattttcatttataaatcaagtctgcttgttt 60
           |||||||||||||||||||||||| |||||||||||||||||||||||            
Sbjct: 216 agaataaaatagtcctgataagttcgaggattttcatttataaatcaa------------ 263

                                                                       
Query: 61  caaaatctttttctttttcgtcttgggtctaccaaggcacagatgtgatttgaaaatagc 120
              |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 264 ---aatctttttctttttcttcttgggtctaccaaggcacagatatgatttgaaaataac 320

                                                                       
Query: 121 acacagtagtattttgtttaagattgtactgttgatatattttaagatttctttaggtaa 180
           ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 acacaatagtattttgtttaagattttactgttgatatattttaagatttctttaggtaa 380

                                                                       
Query: 181 aaagtgatatggcagattt-cccttcaaattaatttacattttaacataatatttcaatg 239
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 aaagtgatatggcagattttcccttcaaattaatttacattttaacataatatttcagtg 440

                                                                       
Query: 240 tgcgaagaacactcaatcatgacataattcattcatgatttagatagtacaaatatttaa 299
           || |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 441 tgtgaagaacactcaatcatgacataatttattcatgatttagatagtataaatatttaa 500

                                                                       
Query: 300 aacattttattgaaaataa-atacatattgttatggtttgaatatactagacc-aggtag 357
           ||||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||
Sbjct: 501 aacattttattgaaaataatatacatattattatggtttgaatatactaggcccaggtag 560

                                                                       
Query: 358 tggcactattagaaggtgtggctctgttggagtagatgtgtcactgtgggtgtgggctct 417
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 tggcactattagaaggtgtggctctgttggattagatgtgtcactgtgggtgtgggctct 620

                                                                       
Query: 418 aagacccttattctagctgcctgaaagccagtattctgctagcagccttcagatgaggat 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 aagacccttattctagctgcctgaaagccagtattctgctagcagccttcagatgaagat 680

                                                                       
Query: 478 gtaaaactctcagttccttgtaccatgcctgtctggatggtgccatgttcctgtcttgat 537
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtaaaactctcaggtccttgtaccatgcctgtctggatggtgccatgttcctgtcttgat 740

                                                                       
Query: 538 gataatggattgaacctctgaatctctaagccaccgctaattaaatgttgtcctttacaa 597
           ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 741 gataatggactgaacctctgaatctctaagccacccctaattaaatgttgtcctttacaa 800

                                                                       
Query: 598 gacttgcctaggtcatggtgtctgttcatagcagtaaaaccctaactaaggtacttacta 657
           ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 801 gacttgccttggtcatggtgtctgttcatagcagtaaaaccctaactaagacacttacta 860

                      
Query: 658 ataatgatttt 668
           |||||||||||
Sbjct: 861 ataatgatttt 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1071
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1061
Effective search space:   699199
Effective search space used:   699199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)