Query= MSMg01no510_n06.b1 MSMg01no510_n06.b1 CHROMAT_FILE:
MSMg01no510_n06.b1 PHD_FILE: MSMg01no510_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:30 2005
(409 letters)
>mm_chr15_89875081_89875889
Length = 809
Score = 760 bits (393), Expect = 0.0
Identities = 405/409 (99%)
Strand = Plus / Minus
Query: 1 gacccaggaacagtgagcgggaaaagacagtgagccctgctaagcaggctggaccgctgc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 gacccaggaacagtgagcgggaaaagacagtgagccctgctgagcaggctggaccgctgc 383
Query: 61 gggatggcaggacttactgctggcccaggtttttgtgtctgagcaaggcagatgttctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gggatggcaggacttactgctggcccaggtttttgtgtctgagcaaggcagatgttctgt 323
Query: 121 gtgtgcagatgggagtttgggattcataagacaattttaattaatggtttcattcagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgtgcagatgggagtttgggattcataagacaattttaattaatggtttcattcagcca 263
Query: 181 taaaatatgggcactttctgtgtaatgcaaaacatattgggagcctatggattaaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taaaatatgggcactttctgtgtaatgcaaaacatattgggagcctatggattaaaatat 203
Query: 241 gccaatttttatttttatttttaattaaagtcctattcctgtgcaagaatgggttttaga 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gctaatttttatttttatttttaattaaagtcctattcctgtgcaagaatgggttttaga 143
Query: 301 aaacaaatgtgttgttaggggcaatatattggcaagcacacggggcagtttggagatgtt 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aaacaaatgtgttgttagaggcaatatattggcaagcacacggggcagtttggagatgtt 83
Query: 361 ggctcttatcagtaggagcagagaaagtcgctgtgtgtttacaattaag 409
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 82 ggctcttatcagtaggagcagagaaagtcactgtgtgtttacaattaag 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_n06.g1 MSMg01no510_n06.g1 CHROMAT_FILE:
MSMg01no510_n06.g1 PHD_FILE: MSMg01no510_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:31 2005
(631 letters)
>mm_chr15_89701664_89702695
Length = 1032
Score = 1123 bits (581), Expect = 0.0
Identities = 619/637 (97%), Gaps = 11/637 (1%)
Strand = Plus / Plus
Query: 1 tttgtaccccattctttgtaaatttttagttctgtaccccatttttaatagggtcgtttg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtaccccattctttgtaaatttgtagttctgtaccccatttttaatagggtcgtttg 260
Query: 61 gttgtctggagtctaacttcttgagatctttgtatataatggatattagccctctatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgtctggagtctaacttcttgagatctttgtatataatggatattagccctctatcag 320
Query: 121 atttagggttggtaatgatcttttcccaatctgttggttgccattttggcctattgacag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttagggttggtaacgatcttttcccaatctgttggttgccattttggcctattgacag 380
Query: 181 tgtcatttgccttacataagctttgcaattttatgaggttccatttgtcaattcttgatc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcctttgccttacataagctttgcaattttatgaggttccatttgtcaattcttgatc 440
Query: 241 tta-----tttttttagctattggtattctgtttagaaaatgactttaaactcttgatat 295
||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagagcata-----agctattggtattctgtttagaaaatgactttaaactcttgatat 495
Query: 296 gcctgcagttatttctaaagaactctgattatgaaactcagctcttacgcttcttgtttt 355
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 496 gcctgcagttatttctaaagaactctgattatgaaactcagctcttaggtttcttgtttt 555
Query: 356 ggtttgttttctcagatttattttttatcaattctttcattgccataattttattttatt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggtttgttttctcagatttattttttatcaattctttcattgccataattttattttatt 615
Query: 416 atttttatagtctacatttccttgctgacattttttttt-cattttttgaattttcttgt 474
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 616 atttttatagtctacatttccttgctgacattttttttttcattttttgaattttcttgt 675
Query: 475 caaggttattgaacatttgtttctctttggcagttttctattctagctttgggatttatt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 caaggttattgaacatttgtttctctttggcagttttctattctagctttgggatttatt 735
Query: 535 tatttaaattcatctgctatttaagtcctttatctgatcattgatcatagttttaaatta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tatttaaattcatctgctatttaagtcctttatctgatcattgatcatagttttaaatta 795
Query: 595 gtactctgaaagaatttttctggcattttagttatcc 631
|||||| ||||||||||||||||||||||||||||||
Sbjct: 796 gtactccgaaagaatttttctggcattttagttatcc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
