NAACCAAAATTGCGGCGTTAAANGAACACCAATTTCGAACCTTGGCGGAA
NNCNNGNNGTAACCGCACGAGGGACCNACAAAACANANNNGNNNNGCAAG
NNANGNNGCNGGGAACCGCCCAACGCNAAAAGACNNANNNNGANGGACNN
GGCACTTAGANACCACCCCGGGGNAGGCAAANGGACCGGNGAGNGGNNNA
AAGAACGGNGGGGGNNCAGGGGGGGGGGCAGGCCAGACCTTATTTAAGCA
NNAGCCNANGNCCNNNCNGNGNGAGAANAGAGAGGAGNNNNCCGGNNNCN
CAGAANGCTTTTTTTTTTCNNNGCCGGNNGGAANNNCNGNAACAANANGG
AATCATCACCCCCGCCCCAGCNAAAGAAAGGAGACACCGGNNCNGACAAN
NAGNGAACACCACCACNAAAATCTCCAACCATATGTTGGATATCTGAGCC
CAAAGTTTGTTCACCTTGTATTACCCATATTTAGAGATAAATGATGGTAT
AGAATCTAGGGGTGGAGAACAGAATTGCAAGAGAATAAGAGCTGCATCTG
TTTGTTTATTTAAAAATTTTATTTATTATTTATATGTACGGTGTGCATCT
GAAATATGTTGGGGAATGGTTGCACAGGACAGAAGAGTGTTTTATTTCTC
AGAGCTAGATTTCCAAGAAATTGTGTACCACCTGACACAGGTGTTCAGAA
TAAAAATCTAGTCCTCTGCAAGACAAGAA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXGGACTTCCATTAAAAACAGAAACTA
TAGCGCTACTGAAAGCCCAACAATAAAGACACATGAATCTTTAAATTTTG
ATGTATGAAATTATATTAATTGATATTTGAAAACTCAAATATGTGTTTCC
TTTCCCAATTGATTTTGGTTGTATTAATTGGCTATGTTAAAGATGTGTGT
CAAAATAATCAGTAGTTGCTATAGGAGATGTTAAATATTCTAGGATATCA
ATACACCAGAAAGAAGACGATATTTGCTCAAGAAAGTCATCATCAATATA
CAGATATCCATAGCAGCAAGGCTTCATCAATCCAGCTAAATATACAGAGG
TTTTGTAAATAAGTTGAAGGTAAACTTAAAACCAGAAATCATCTCCACCA
CTGCTTCTAGTACTTGCTCTCTCCCTGCCCTTTAATCGAAGCATCTCCAT
TATGCTCCGGGCATAGACATCCCTCAAGTTAACACTAATATATGAGTCAG
TGGCTATATTCTTGGTAAGTTTCTTGAGAGCTTCACGCTGTCTCACAGCT
GCTTCCTTGAGTTTCAAGGTGAAGTAGCAAGCAGAGAATCGATCATTAAT
AATGGCAATAGGCAAGGCCAAGACAAGGATTCCTGACAGAATACACATGA
AGGCCACGATTTTGCCTGTGGTGGTGTCTGGTCTAATGTC

Query= MSMg01no510_o07.b1 MSMg01no510_o07.b1 CHROMAT_FILE:
MSMg01no510_o07.b1 PHD_FILE: MSMg01no510_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:35 2005
         (216 letters)



>mm_chr15_45102205_45102820
          Length = 616

 Score =  410 bits (212), Expect = e-119
 Identities = 215/216 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccaaccatatgttggatatctgagcccaaagtttgttcaccttgtattacccatatttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccaaccatatgttggatatctgagcccaaagtttgttcaccttgtattacccatatttag 271

                                                                       
Query: 61  agataaatgatggtatagaatctaggggtggagaacagaattgcaagagaataagagctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agataaatgatggtatagaatctaggggtggagaacagaattgcaagagaataagagctg 211

                                                                       
Query: 121 catctgtttgtttatttaaaaattttatttattatttatatgtacggtgtgcatctgaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 210 catctgtttgtttatttaaaaattttatttattatttatatgtacggtgtgtatctgaaa 151

                                               
Query: 181 tatgttggggaatggttgcacaggacagaagagtgt 216
           ||||||||||||||||||||||||||||||||||||
Sbjct: 150 tatgttggggaatggttgcacaggacagaagagtgt 115


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space:   125649
Effective search space used:   125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no510_o07.g1 MSMg01no510_o07.g1 CHROMAT_FILE:
MSMg01no510_o07.g1 PHD_FILE: MSMg01no510_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:35 2005
         (661 letters)



>mm_chr15_44939974_44941034
          Length = 1061

 Score = 1239 bits (641), Expect = 0.0
 Identities = 656/661 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccattaaaaacagaaactatagcgctactgaaagcccaacaataaagacacatgaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccattaaaaacagaaactatagcgctactgaaagcccaacaataaagacacatgaatc 260

                                                                       
Query: 61  tttaaattttgatgtatgaaattatattaattgatatttgaaaactcaaatatgtgtttc 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tttaaattttgatgtatgaaattatattaattgatatttgaaaattcaaatatgtgtttc 320

                                                                       
Query: 121 ctttcccaattgattttggttgtattaattggctatgttaaagatgtgtgtcaaaataat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttcccaattgattttggttgtattaattggctatgttaaagatgtgtgtcaaaataat 380

                                                                       
Query: 181 cagtagttgctataggagatgttaaatattctaggatatcaatacaccagaaagaagacg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 cagtagttgctataggagatgttaaatattctaggatatcaatacaccagaaagaagatg 440

                                                                       
Query: 241 atatttgctcaagaaagtcatcatcaatatacagatatccatagcagcaaggcttcatca 300
           | |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagtgctcaagaaagtcatcatcaatatacagatatccatagcagcaaggcttcatca 500

                                                                       
Query: 301 atccagctaaatatacagaggttttgtaaataagttgaaggtaaacttaaaaccagaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atccagctaaatatacagaggttttgtaaataagttgaaggtaaacttaaaaccagaaat 560

                                                                       
Query: 361 catctccaccactgcttctagtacttgctctctccctgccctttaatcgaagcatctcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catctccaccactgcttctagtacttgctctctccctgccctttaatcgaagcatctcca 620

                                                                       
Query: 421 ttatgctccgggcatagacatccctcaagttaacactaatatatgagtcagtggctatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatgctccgggcatagacatccctcaagttaacactaatatatgagtcagtggctatat 680

                                                                       
Query: 481 tcttggtaagtttcttgagagcttcacgctgtctcacagctgcttccttgagtttcaagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcttggtaagtttcttgagagcttcacgctgtctcacagctgcttccttgagtttcaagg 740

                                                                       
Query: 541 tgaagtagcaagcagagaatcgatcattaataatggcaataggcaaggccaagacaagga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaagtagcaagcagagaatcgatcattaataatggcaataggcaaggccaagacaagga 800

                                                                       
Query: 601 ttcctgacagaatacacatgaaggccacgattttgcctgtggtggtgtctggtctaatgt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttcctgacagaatacacatgaaggccacgattttgcctgtggtggtgtctggtctaatgt 860

            
Query: 661 c 661
           |
Sbjct: 861 c 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)