Query= MSMg01no512_a08.b1 MSMg01no512_a08.b1 CHROMAT_FILE:
MSMg01no512_a08.b1 PHD_FILE: MSMg01no512_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:02 2005
(179 letters)
>mm_chr15_87554184_87554762
Length = 579
Score = 339 bits (175), Expect = 8e-98
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1 ggccatactttataaaaaccaaacaaaactgggttcctcccaggagtcaacatagggccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggccatactttataaaaaccaaacaaaactgggttcctcccaggagtcaacatagggccc 260
Query: 61 tgaccatagctagctgagtagcaatacacaggtgtgcctaggctcccatcagtgttgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaccatagctagctgagtagcaatacacaggtgtgcctaggctcccatcagtgttgtgg 320
Query: 121 gtcaccacagaactccccgaatgagatatgaggggggaaacatctaaacttcagaagga 179
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaccacagagctccccgaatgagatatgaggggggaaacatctaaacttcagaagga 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no512_a08.g1 MSMg01no512_a08.g1 CHROMAT_FILE:
MSMg01no512_a08.g1 PHD_FILE: MSMg01no512_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:02 2005
(629 letters)
>mm_chr15_87727177_87728208
Length = 1032
Score = 1058 bits (547), Expect = 0.0
Identities = 608/633 (96%), Gaps = 14/633 (2%)
Strand = Plus / Minus
Query: 1 tgtccaagctgtatcagacttggtg---accagttcagtgacgatatgagggaggtagag 57
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 641 tgtccaagctgcatcagacttggtgatcaccagttcagtgacgatatgagggaggtagag 582
Query: 58 tccagtggtttgaggaacatggtgaca-atcagcagctaacgtgccaagtggacaggcat 116
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 581 tccagtggtttgaggaacatggtga-agatcagcagctaacgtgccaagtggacaggcat 523
Query: 117 catcttgtaagtgaatgccattaaatgccatggtttctcacgtttggctctgcatgagac 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 catcttgtaagtgaatgccattaaatgccatggtttctcacgtttggctctgcatgagac 463
Query: 177 tctgcctggatagatatcaggtcagggaaggcatattgtcatagcaccccctaaattact 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tctgcctggatagatatcaggtcagggaaggcatattgtcatagcaccccctaaattact 403
Query: 237 agaaggtccaccagacactgcagggcccagagttaaggacatctccctgaaaggctcagc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agaaggtccaccagacactgcagggcccagagttaaggacatctccctgaaaggctcagc 343
Query: 297 tgtcagctccatcgccatgtgctctgccagcttgtaagaccctaaccagcctagcaaaga 356
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 342 tgtcagctccatcgccatgtgctctgccagcttgtaagaccctaaccagcccagaaaaga 283
Query: 357 gggatgacagtgcacataaaccagaaaaggtggggcagccaagtgctccagaccctagag 416
| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 282 gtgatgacggtgcacataaaccaggaaaggtggggcagccaagtgctccagaccctagag 223
Query: 417 gaggagtagaaagcataaaaggccattagactagggaggaagaaaatgccattagactag 476
|||||| |||||||| |||||| | || ||||||||||| |||||||||||||||
Sbjct: 222 gaggaggagaaagcacaaaagg---t----ct-gggaggaagaagatgccattagactag 171
Query: 477 gactgaagcacagctgttccccaactcctgagaccccagggaccccctggagtgagtggg 536
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 170 gactgaagcacagctgttccccaactcctgaggccc-agggaccccctggagtgagtggg 112
Query: 537 actcataggccacacaagcagggtgaagtctcagtaggacagtggattcctgcctagaaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 actcataggccacacaagcagggtgaagtctcagtaggacagtggattcctgcctagaaa 52
Query: 597 cccaccagcagcaggtacatatgtgaccacaga 629
|| ||||||||||||||||||||||||||||||
Sbjct: 51 cctaccagcagcaggtacatatgtgaccacaga 19
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1032
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1022
Effective search space: 632618
Effective search space used: 632618
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
