TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATTATCTTTTTATTTAGAGCTAGCTTAAAACTTTTGGCATAGGCGGTA
AAATGATTTTTTTTTGACTAATTGACTCAGGAACCATAACACATTTGAGT
TTTGGGACACCAAAGAGGAAATCCAATCCAGGACCCAACTGTGATGTGTC
TAATTGCCGTGACTGTTCAATGAATGGATGATTCACCTTTGAAAGCTTAG
AAACATGACTCCTGTAAAAATACCAGCGAAGTCCGAGGATATGGATCCTA
ATCAAAACTGGTTCCCTTGCACTGAAGAATAGAGAGATTTCAGAGGCGTT
TCTGTTCACATGGTGCGTTGAAGCATTGCAATTGAGTCTGTAAAAAACAA
ACAAGCAAACACAAAACTGGGTTAAGAGGTGGACAAAAAGTATGGTGTAT
TGATGATGTTGACGTCATTCGGCGTAAAGAAAATTGGGCTAGAGCAGAGA
ATGGCTGTCTTGAATTGTCGGAGCTACTCGGTATTGGCACTCCTCAGCAA
ATGCTCCTTTTTCTCCACCCAGGGTTGAACAGGAGGAAATGGGTTTAAGT
TGAAGTCGGATCTATTTAGGTGAAATATGCTAGAATGCTTCCTGACCTTG
AAAGCTATTTGGCTTAAGAATGGAATGCTTAGCCTGGACAAGCAATCTGT
TTCCTCCGAAAGATAATCCTAATGATTAACGATATTTCTGCATC

ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGGTGGCAAGGAAGACAAAAAAAGAGAAG
AAAAGGAAGTGAGACAACAGGAAGAAAATGAAAAAGGGAGAAGGAAGATG
AGAAATACAATAAATAATTTAAAATTAATAACAGATAAATAGGTTGATGA
GCATGGCTATAGTAATGTTATCACAAATATACGATATGTCCAAAATTTTC
ATATTATAAAAATAAATTATGATCAAGCTTTTTACATAAAATACTTCAAT
ATTTGTTTGAAAAATAAAACTTTGGGAGCCAGAGAGATTCTTCAATGACT
GAGTCTACATACTTCTTCCAGAGGACATGGATTTTATTACTAGCACCCAC
AAGCAAGCTGCTTATAACTGTCTATATGACCTGCTCCAGGAGAGAATACA
TGTGATCCTGTCCTCCTCAGGTACCTGTCCAGTCCATGTACAGCACACAA
GCACACACACACACACACACACACACACACACACACACACGCGCGCGCAC
ACATAATGAAAAGTAAAACGTAAATCTTTAGTAACTAAATTGCATCATCA
AAATAAGGCCAAGCAAGCAAGGAAACATCTGCAGAGTACACAGAAGGCTA
TAGGTTCAATTCCTTGTACTAGACCTCCAAAATCAAAAGTTAAAAGTTAT
CAAAACTTTTTCCACATTCTGTTTCAGGTTAATTCCTTCTACTT

Query= MSMg01no512_p02.b1 MSMg01no512_p02.b1 CHROMAT_FILE:
MSMg01no512_p02.b1 PHD_FILE: MSMg01no512_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:16 2005
         (524 letters)



>mm_chr15_50202949_50203874
          Length = 926

 Score =  965 bits (499), Expect = 0.0
 Identities = 516/523 (98%), Gaps = 4/523 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccattatctttttatttagagctagcttaaaacttttggcataggcggtaaaatg 64
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaattccattatctttttatttaaagctagcttaaaacttttggcataggcggtaaaatg 667

                                                                       
Query: 65  a---tttttttttgactaattgactcaggaaccataacacatttgagttttgggacacca 121
           |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 attttttttttttgactaattgactcaggaaccataacacatttgagttttgggacacca 607

                                                                       
Query: 122 aagaggaaatccaatccaggacccaactgtgatgtgtctaattgccgtgactgttcaatg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aagaggaaatccaatccaggacccaactgtgatgtgtctaattgccgtgactgttcaatg 547

                                                                       
Query: 182 aatggatgattcacctttgaaagcttagaaacatgactcctgtaaaaataccagcgaagt 241
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aacggatgattcacctttgaaagcttagaaacatgactcctgtaaaaataccagcgaagt 487

                                                                       
Query: 242 ccgaggatatggatcctaatcaaaactggttcccttgcactgaagaatagagagatttca 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ccgaggatatggatcctaatcaaaactggttcccttgcactgaagaatagagagatttca 427

                                                                       
Query: 302 gaggcgtttctgttcacatggtgcgttgaagcattgcaattgagtctgtaaaaaacaaac 361
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 426 gaggcgtttctgttcacatggtgcattgaagcattgcaattgagtctgtaaaaaacaaac 367

                                                                       
Query: 362 aagcaaacacaaaactgggttaagaggtggacaaaaagtatggtgtattgatgatgttga 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aagcaaacacaaaactgggttaagaggtggacaaaaagtatggtgtattgatgatgttga 307

                                                                       
Query: 422 cgtcattcggcgtaaagaaaattgggctagagcagagaatggctgtcttgaattgtcgga 481
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 306 cgtcattcggcgtaaagaaaattgggctagagc-gagaatggctgtcttgaattgtcgga 248

                                                      
Query: 482 gctactcggtattggcactcctcagcaaatgctcctttttctc 524
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gctactcggtattggcactcctcagcaaatgctcctttttctc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 926
Length adjustment: 10
Effective length of query: 514
Effective length of database: 916
Effective search space:   470824
Effective search space used:   470824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)