Query= MSMg01no514_a16.b1 MSMg01no514_a16.b1 CHROMAT_FILE:
MSMg01no514_a16.b1 PHD_FILE: MSMg01no514_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:46 2005
(674 letters)
>mm_chr15_58889487_58890564
Length = 1078
Score = 1237 bits (640), Expect = 0.0
Identities = 664/674 (98%), Gaps = 4/674 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgcagtgtgaggcagagcagacttgagtctgggttcacacgggactggggtgt 64
|||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctacggtgggaggcagagcagacttgagtctgggttcacacgggactggggtgt 264
Query: 65 gaaggtgggacgggagactatgaattgatacggctctaggtgcctgcttcgcgcttctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaggtgggacgggagactatgaattgatacggctctaggtgcctgcttcgcgcttctct 324
Query: 125 gt----gacacttctaaatttaagccagacgtgtgtgccgatccacctccctctgtcttg 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtctgtgacacttctaaatttaagccagacgtgtgtgccgatccacctccctctgtcttg 384
Query: 181 cctaaggatgtcgccttctcctgtagaatacacgcgtctactcaccgcagctgggactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctaaggatgtcgccttctcctgtagaatacacgcgtctactcaccgcagctgggactgt 444
Query: 241 agctttccggctttgtttatgaagtcttcccaaactggatagctcccctaggacagaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctttccggctttgtttatgaagtcttcccaaactggatagctcccctaggacagaaca 504
Query: 301 aaagccagcaatcagtcacagtgtgatgagccaagcacccaattccaaccatgcaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagccagcaatcagtcacagtgtgatgagccaagcacccaattccaaccatgcaaggaa 564
Query: 361 caatctgcagatgtgatcctcctttgaagggttctgtgatatacacactagagacaggca 420
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 565 caatctgcagatgtgatcctcctctgtagggttctgtgatatacacactagagacaggca 624
Query: 421 atagccctggaaccgtttcagatgtgcctgtccctataatcttgcaaataaacacagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atagccctggaaccgtttcagatgtgcctgtccctataatcttgcaaataaacacagaca 684
Query: 481 ccaacaggaacctagctccacaaagccaaacacctacaccttggagtcagcattttgtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccaacaggaacctagctccacaaagccaaacacctacaccttggagtcagcattttgtat 744
Query: 541 gaacatgatgggtccaaattttaaaaatatagaacatgcccggcagtggtggtacacgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaacatgatgggtccaaattttaaaaatatagaacatgcccggcagtggtggtacacgcc 804
Query: 601 ttttatcctagcacttgggagacaggcacaggcagatctatctctgtgagtttgaaacca 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttttatcctagcacttgagagacaggcacaggcagatctatctctgtgagtttgaaacca 864
Query: 661 gtctcatcttcaga 674
||||||||||||||
Sbjct: 865 gtctcatcttcaga 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1078
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1068
Effective search space: 709152
Effective search space used: 709152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_a16.g1 MSMg01no514_a16.g1 CHROMAT_FILE:
MSMg01no514_a16.g1 PHD_FILE: MSMg01no514_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:46 2005
(640 letters)
>mm_chr15_59045371_59046410
Length = 1040
Score = 619 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Minus
Query: 321 tggatattagtgcttggctcattttctccttttcattcagtcagagaccccaatccatgt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tggatattagtgcttggctcattttctccttttcattcagtcagagaccccaatccatgt 981
Query: 381 catgatgtcacccatgttcagagtgggtctcccgtcctcaatttatcttctctggaagca 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 catgatgtcacccatgttcagagtgggtctcccgtcctcaatttatcttctctggaagca 921
Query: 441 ccctcaaagacatgcccaacggtgcgtctccatggtaattctaagtcaagggaaggtgac 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ccctcaaagacatgcccaacggtgcgtctccatggtaattctaagtcaagggaaggtgac 861
Query: 501 aatgaagattggtcatcacacatacttaacacctgtgatatgccatgctccaggacagta 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 aatgaagattggtcatcacacatacttaacacctgtgatatgccatgctccaggacagta 801
Query: 561 tctaggaataaaaacagagacagaaacatacccctaccttcaaggctgataactaacagg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tctaggaataaaaacagagacagaaacatacccctaccttcaaggctgataactaacagg 741
Query: 621 aaagactgacatacatttca 640
||||||||||||||||||||
Sbjct: 740 aaagactgacatacatttca 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
