Query= MSMg01no515_n04.b1 MSMg01no515_n04.b1 CHROMAT_FILE:
MSMg01no515_n04.b1 PHD_FILE: MSMg01no515_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:18 2005
(629 letters)
>mm_chr15_17900912_17901940
Length = 1029
Score = 1125 bits (582), Expect = 0.0
Identities = 617/632 (97%), Gaps = 6/632 (0%)
Strand = Plus / Plus
Query: 4 ggaattctaaatgaatgattagtagaatagtcattgatgagaacaaccacacagaaggtc 63
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 198 ggaattctaaatgaatgattagtagaatagccattgatgagaacaaccacacagaaggtc 257
Query: 64 cctggaggtacaggtggtaatgtgagtagatggtattagtctcagatatcacaggaatta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctggaggtacaggtggtaatgtgagtagatggtattagtctcagatatcacaggaatta 317
Query: 124 tccatctatgactgtgaaattcataattaaaaatgacttttccttagttttatccaaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tccatctatgactgtgaaattcataattaaaaatgacttttccttagttttatccaaaat 377
Query: 184 aaaataattctcttaacagagattccttcccatatttttttattctgttagtgaacacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaaataattctcttaacagagattccttcccatatttttttattctgttagtgaacacat 437
Query: 244 ttactggttttgggatctctctctctctctcactctctctcgctctctctctctctctgt 303
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
Sbjct: 438 ttactggttttgggatctctctctctctctctctctctctctctctctctctctctctct 497
Query: 304 gtgtgt------gtgtgtgtgtgtgcatgtgtgtgtacagagagtactttttaaagatgt 357
| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctttctctctctgtgtgtgtgtgtgcatgtgtgtgtacagagagtactttttaaagatgt 557
Query: 358 gataaggttattataaagctcgcccacaatgtgacaatatgatgaatggaatggagaaat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gataaggttattataaagctcgcccacaatgtgacaatatgatgaatggaatggagaaat 617
Query: 418 gaaattttcttgtattaaattttctttctttcaaacttcattcctgaactaaatttagct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaaattttcttgtattaaattttctttctttcaaacttcattcctgaactaaatttagct 677
Query: 478 ttgacagtatataatgtcatttgcttgacttgctatagaaatcaagaacgagaatgccca 537
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 678 ttgacagtatataatgtcatttgcttgacttgctatagaaatcaagaacgataatgccca 737
Query: 538 cagaagaaaaaaatatatggcttcttccaaatttctcatatctcttgtaacattatattt 597
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 738 cagaagaaaaaaatatatggcttcttccaaatttctcatatctcttataacattatattt 797
Query: 598 tatcctcaatccaagaaaacttgtatagttaa 629
||||||||||||||||||||||||||||||||
Sbjct: 798 tatcctcaatccaagaaaacttgtatagttaa 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_n04.g1 MSMg01no515_n04.g1 CHROMAT_FILE:
MSMg01no515_n04.g1 PHD_FILE: MSMg01no515_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:18 2005
(332 letters)
>mm_chr15_17968546_17969276
Length = 731
Score = 605 bits (313), Expect = e-177
Identities = 325/329 (98%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 1 cttttattgattttgtgcaaatttgcatgtgtgaggtcatccctatttttaaaagaagat 60
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 528 cttttattgattttgtgtaaatttgcatgtatgaggtcatccctatttttaaaagaagat 469
Query: 61 aattcatcacctccactgataaaatgccttttacttgcttttcttcctgacttgccctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aattcatcacctccactgataaaatgccttttacttgcttttcttcctgacttgccctag 409
Query: 121 ttatactctctggatttggtgtctggctttgcatgacgaggaatagattgatttgtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttatactctctggatttggtgtctggctttgcatgacgaggaatagattgatttgtggtg 349
Query: 181 atgaacaaaatttaagaacactgttgagctcagatagcagtcgtatttttgagagttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 atgaacaaaatttaagaacactgttgagctcagatagcagtcgtatttttgagagttttt 289
Query: 241 acattcatattaataggaaaattggtccattggttatatttgttgtgtttttgtttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 acattcatattaataggaaaattggtccattggttatatttgttgtgtttttgtttgttt 229
Query: 301 tgtttttttgggntgggtgggtgggtatt 329
|| ||||||||| ||||||||||||||||
Sbjct: 228 tgattttttggg-tgggtgggtgggtatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
