Query= MSMg01no515_p15.b1 MSMg01no515_p15.b1 CHROMAT_FILE:
MSMg01no515_p15.b1 PHD_FILE: MSMg01no515_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:31 2005
(681 letters)
>mm_chr15_91941871_91942955
Length = 1085
Score = 1247 bits (645), Expect = 0.0
Identities = 670/685 (97%), Gaps = 12/685 (1%)
Strand = Plus / Minus
Query: 5 gaattccctgggtatgtgagagagctctgcatacaggaaatgaggaggtgatgttggggc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaattccctgggtatgggagagagctctgcatacaggaaatgaggaggtgatgttggggc 826
Query: 65 atccgtactagctgtggatgtggacattgtcttcttagctgattcctattccctaaagcg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 atccgtactagctgtggatgtggacattgtcttcttagctgattcctattccctaaagcg 766
Query: 125 atactcttaacacgcaggtcaaggaactgtggtgagaactaactagcacagcaactcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atactcttaacacgcaggtcaaggaactgtggtgagaactaactagcacagcaactcaaa 706
Query: 185 ttgtaagttataaactgttagctaaatgctgtcaaggaacttaaagcaataaaacatatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttgtaagttataaactgttagctaaatgctgtcaaggaacttaaagcaataaaacatatg 646
Query: 245 aaaatgaagtaagattatgaagttaatatccattgtacttgagaaatttaataaaagcat 304
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaaatgaagtaagattatgaagtcaatatccattgtacttgagaaatttaataaaagcat 586
Query: 305 atttttataagtctggagaagtctaggttactaagacaaatcacttctgtctaaatgact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atttttataagtctggagaagtctaggttactaagacaaatcacttctgtctaaatgact 526
Query: 365 tcttacaagaagtcactcttagaaacagaaattctgggattgaagaaacaaattacctgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcttacaagaagtcactcttagaaacagaaattctgggattgaagaaacaaattacctgt 466
Query: 425 acagttgattagattaggaaagtcaatttgctcttttttttt--------aaaaaatgtt 476
||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 465 acagttgattagattaggaaagtcaatttgctc----tttttaaaaaaaaaaaaaatgtt 410
Query: 477 tttaaggtatttttactttccaaaaggtaaataaaagtagtgggaaaattggtcttaatt 536
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttaaaggtatttttactttccaaaaggtaaataaaagtagtgggaaaattggtcttaatt 350
Query: 537 cacccaaaaaaatacactgaaggaataattctattccatttctaaataattaaaaataat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cacccaaaaaaatacactgaaggaataattctattccatttctaaataattaaaaataat 290
Query: 597 gattgccttttggacttggatattatgtaagctactttgaaaaattccaaacataatggt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gattgccttttggacttggatattatgtaagctactttgaaaaattccaaacataatggt 230
Query: 657 tttaaaaacacagctctttacatta 681
|||||||||||||||||||||||||
Sbjct: 229 tttaaaaacacagctctttacatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1085
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1075
Effective search space: 721325
Effective search space used: 721325
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_p15.g1 MSMg01no515_p15.g1 CHROMAT_FILE:
MSMg01no515_p15.g1 PHD_FILE: MSMg01no515_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:32 2005
(684 letters)
>mm_chr15_91764468_91765551
Length = 1084
Score = 1255 bits (649), Expect = 0.0
Identities = 676/685 (98%), Gaps = 2/685 (0%)
Strand = Plus / Plus
Query: 1 ctgctcttgctgccgtgaggaaaactatgagttcagggacattgcacttgagtgttctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgctcttgctgccgtgaggaaaactatgagttcagggacattgcacttgagtgttctga 260
Query: 61 cggcagcaccatcccttacagatacaggcacactaccacctgctcttgtcgggaccagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cggcagcaccatcccttacagatacaggcacactaccacctgctcttgtcgggaccagtg 320
Query: 121 tgaacagtctaaagccagttaatgcccgcgttgcctttccggttgctcttattctagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaacagtctaaagccagttaatgcccgcgttgcctttccggttgctcttattctagaag 380
Query: 181 gatagaaaaagaatcattaaataatgagaatggatgtgtgtgagtttgtcttcttcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatagaaaaagaatcattaaataatgagaatggatgtgtgtgagtttgtcttcttcaaaa 440
Query: 241 ggcgaggctcacaatgaggcatggttgtcattgttttgttattgatgctggctggaaaat 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ggcgaggctcacaatgaggcatggttatcattgttttgttattgatgctggctggaaaat 500
Query: 301 aaacgctatggtgcaaggacttggtaaagacgtggatttgttgacacagtgtgaattctg 360
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacgccatggtgcaaggacttggtgaagacgtggatttgttgacacagtgtgaattctg 560
Query: 361 caagtaacagagaacaccaacccctcacagctctcagtgtcctcaggccagcgctctctg 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgagtaacagagaacaccaacccctcacagctctcagtgtcctcaggccagcgctctctg 620
Query: 421 tttcattccctctctcctttcactacttaataacaatgtactctcccttcctttccatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcattccctctctcctttcactacttaataacaatgtactctcccttcctttccatgt 680
Query: 481 ccatgtcccagctgaaccaccactctcccggtgccatatcaccctctcctgggacattgt 540
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 ccatgtctcagctgaaccaccactctccctgtgccatatcaccctctcctgggacattgt 740
Query: 541 gacttcctaattgttcccaagagtttcatatcatttctactcttgctttcccatgcattt 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 741 gacttcctaattgttcccaagagtttcatatcatttctactcttgcttccccatgcattt 800
Query: 601 ttctagctattccacaccattttaaatccataattggccctttgtgaacag-tttcattt 659
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 801 ttctagctattccacaccattttaaatccataattggccctttgtgaacagcttt-attt 859
Query: 660 tgtggactccaacttttgtaactgc 684
|||||||||||||||||||||||||
Sbjct: 860 tgtggactccaacttttgtaactgc 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
