TTTTTAANNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCTTTCTTTACCTCTGTGCCCCATTTTAATAGGATT
ATTTAGTTCTCTTGAGCCTAAATTCTTGAGTTCTTTGTATATATTGGATA
TTATCCCTCTATCAGATGTAGGGTTGTTAAAGATCTTTTCCCATTTTTCC
CAGAAGTTTGACAATGTCCTTTGTTACGTGTTATATATTAATTATTTATT
ATATATAATCTTAATATGTTATTGATGAAAACTATATGAATATTGTCAAA
TACATCATGATCAAATCCTCTAAAATTGCTAATAAATACATTATTTAAAA
TGTCTTGTGAGTCCCATTGCTTATCTAAAGACAGTTCTTCAACTGAGTAG
GACATTCAGGAAAGAAAGTCAGAGAGGAAACAATAATAACTTAACCCATG
ATGATATCCCTTGATATGAAAGCAGAAGGCAGTATATTTTCACCTGTGTT
TATAGGTTCTCCTTGAGAATACTGCCTTCTGCTTTGATGTACTGCATGGT
TCTATGTTCCCTTTCTCAGCATTAAAGTATATTTTTGAATTTTACTGTCT
TATAACTTTTGAGTCTCAGTATTTGCTCAATACTGATCAAATGCTACTGC
TTCAGCTGTTTAAGGGCTGAAATGCACTTATGCATGAACTAAACTTCCCT
TACATATCTTAATGAAGAAATCCACAGA

GGGATTNAGCAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCATTAGGGTGACCT
AGAAGCTCCCATAATAATGTTGAATATTATTGTTTCTCTTCATTGCTCAC
AATAATTAGATATTCACATTATATTGTTGAAAAGATCAAATACTTTGGTT
TTAGACCACAGGAAAATTAGGCTAAATTGGGCTGAAAACCTGGTAGTTGT
TCAGTAGGTTTGATGGGGCTGGAGAGTATGATGTAGACAGAATGGAAGGG
GGATAATGGCAAGTCTTATTTACCAGTAGACTCTCTGTGCTGTGGTATTG
ACCTTCTAGGAAAATGTGCCTCCGGTGAAATAATGACAGCAGTGGATGTA
ACAAACCTATATTTATTTGAATTGATATCTGTTACAGTGAAGGTAAATCA
TGCTCAATATTGTCAAACTTATCAAGAAAACTTACATAGGGTGGTCAAAA
TCTCAAGGGGTAAACCTTCAATTATTGTTTTGATAAAAAGACATGTTTTT
AAACGGCTATAAATATTTGTGTTTGTACCGATATTTTTGTGTTGTTCTTA
GCTTACACAAAGGAAATTTCACTCTTAGTGAGTATGAGTGAACCCAGATG
TAAAGTCAGAAGAAATGCTTAGAACAAGCAAGTTCGTTGTTGTTGTTGTT
GATATTTTAATTGGTTATTTTATCTGG

Query= MSMg01no516_e17.b1 MSMg01no516_e17.b1 CHROMAT_FILE:
MSMg01no516_e17.b1 PHD_FILE: MSMg01no516_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:57 2005
         (639 letters)



>mm_chr15_17167263_17168305
          Length = 1043

 Score = 1067 bits (552), Expect = 0.0
 Identities = 613/636 (96%), Gaps = 9/636 (1%)
 Strand = Plus / Minus

                                                                        
Query: 9    tctttctttacctctgtgcccca-ttttaataggattatttagttctcttgagcctaaat 67
            ||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1043 tctttgtttagctctgtgccccatttttaataggattatttagttctcttgagcctaaat 984

                                                                        
Query: 68   tcttgagttctttgtatatattggatattatccctctatcagatgtagggttgttaaaga 127
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  ttttgagttctttgtatatattggatattatccctctatcagatgtagggttgttaaaga 924

                                                                        
Query: 128  tcttttcccatttttcccagaagtttgacaatgtcctttgttacgtgttatatattaatt 187
            |||||||||||||||  | ||   |||||||||||||||||||||||||||||||| |||
Sbjct: 923  tcttttcccatttttttctga---ttgacaatgtcctttgttacgtgttatatatt-att 868

                                                                        
Query: 188  atttattatatataatcttaatatgttattgatgaaaactatatgaatattgtcaaatac 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  atttattatatataatcttaatatgttattgatgaaaactatatgaatattgtcaaatac 808

                                                                        
Query: 248  atcatgatcaaatcctctaaaattgctaataaatacattatttaaaatgtcttgtgagtc 307
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  atcatgatcaaattctctaaaattgctaataaatacattatttaaaatgtcttgtgagtc 748

                                                                        
Query: 308  ccattgcttatctaaagacagttcttcaactgagtaggacattcaggaaagaaagtcaga 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  ccattgcttatctaaagacagttcttcaactgagtaggacattcaggaaagaaagtcaga 688

                                                                        
Query: 368  gaggaaacaataataacttaacccatgatgatatcccttga--t--atgaaagcagaagg 423
            ||||||||||||||||||||| ||||||||||||||||| |  |  ||||||||||||||
Sbjct: 687  gaggaaacaataataacttaagccatgatgatatcccttaacctgcatgaaagcagaagg 628

                                                                        
Query: 424  cagtatattttcacctgtgtttataggttctccttgagaatactgccttctgctttgatg 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627  cagtatattttcacctgtgtttataggttctccttgagaatactgccttctgctttgatg 568

                                                                        
Query: 484  tactgcatggttctatgttccctttctcagcattaaagtatatttttgaattttactgtc 543
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 567  tactgcatggttctatgttccttttctcagcattaaagtatatttttgaattttaatgtc 508

                                                                        
Query: 544  ttataacttttgagtctcagtatttgctcaatactgatcaaatgctactgcttcagctgt 603
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507  ctataacttttgagtctcagtatttgctcaatactgatcaaatgctactgcttcagctgt 448

                                                
Query: 604  ttaagggctgaaatgcacttatgcatgaactaaact 639
            |||||||||||||||||||||||||| |||| ||||
Sbjct: 447  ttaagggctgaaatgcacttatgcataaactcaact 412


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1043
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1033
Effective search space:   649757
Effective search space used:   649757
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)