NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTAGCTGTGTACCCCGTTTTTAATAGGGTTATTTG
GTTCTCTGGAGTCTAACTTCTTGAGTTCTTTGCATATATTGGATATTAGC
CCCCATCTGATTTAGGAAAGATCTTTTCCTAATCTGTTGGTTGCCTTTTT
GTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGAG
ATCCCATTTGTTGATTCTTGATCTTACAGGACAAGCCATTGGTGTTCTTT
CAGGAATTTTTTTCCTGTGTGCCCATATGTTAGAGGCTCTTCCCCACTTT
CTCCTCTATAAGTTTCAGTGTCTTTGGTTTTATGTGGAGTTCCTTAATCC
ACTTAGACTTGAACTTTGTATAAGGAGATAAGAATGGATCAATTCCCATT
CTTCCACATGCTAACCGTCAGTTGAACCAACACCATTTTGTTGAAAATGC
TGATTTTTTTCCACTGGATGGTTTTAGCTTTGCTTCCCCAACTTCTCCTA
GCTCCCTCCTAGCTCCCCTCTCTCCCAGATCCACTCTCCTTCTGTTTCTT
CTTCAGAAAATGAGCAGGCCTCTAACAGATGACATCCAAAGGAGAAAAAA
CAAGATACAATAAAACAAAGCAAAAGATTCATATCAAGGCTGGACAAGGC
AATCCAATAGAAAGGACTCTTAAAAGCATCTAAGAGTGGATACTATATGG
ATT

NNCCGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGATTCTTAAATAC
ACTCAAAAAAGTGCTTGGTTAATGCCATGATATTTGTGCCACCATTACAC
CAGTATACCTTGCAGGTAGGTTGCTGCTGTAGGTTACAGAATTTGTTATT
GGGTGATATCAATGATTATTTTTCTCTTCCACAAAGTTGTATAGAAAGTA
CTCTGTACAATAATGAACTACATTAACAATTTGAATTCCACCCACAGAAT
TGACAAGAAAGTAGTTCAACAGAATCAAAGCCATTAGAATCTAAGAAGTG
GAATCTCATCTGTATCCATGGGAAAATCTAGTCTCCCTAACTTATTGGTC
ACTTATTTATTTTTCTCTTCAAAATGCACTAAGTACAATTTATTTACTTG
TTGAATTCTGAGGGTTATTCAACTGTCCTGCCCTAACTCCAGTTTCACTT
TGTGATCAAACCCAGGGATACAGCTTTTAGTTGGGCACCAGCTAAATTTC
TATGTGTTCAGTGGTCTAAGTAAGTGGTGCCTTCAGTAATAGGGCCTTAT
TGTGAGGTTCTAGAGGGGAGCTTTCTTCTTATTTTCTATTCCTGTGATAA
AACACTATGCCCAAGGTAACTTACAAAAAAAAGTCTTTAATTTGGAGATT
ATGGATTCTGAANGTTGGTTGGTAAATTCCATAACATTTTTTCATGATTA
TCATGGAACGG

Query= MSMg01no516_p01.g1 MSMg01no516_p01.g1 CHROMAT_FILE:
MSMg01no516_p01.g1 PHD_FILE: MSMg01no516_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:51 2005
         (626 letters)



>mm_chr15_43385541_43386566
          Length = 1026

 Score = 1195 bits (618), Expect = 0.0
 Identities = 624/626 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgattcttaaatacactcaaaaaagtgcttggttaatgccatgatatttgtgccaccatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgattcttaaatacactcaaaaaagtgcttggttaatgccatgatatttgtgccaccatt 260

                                                                       
Query: 61  acaccagtataccttgcaggtaggttgctgctgtaggttacagaatttgttattgggtga 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaccagtataccctgcaggtaggttgctgctgtaggttacagaatttgttattgggtga 320

                                                                       
Query: 121 tatcaatgattatttttctcttccacaaagttgtatagaaagtactctgtacaataatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcaatgattatttttctcttccacaaagttgtatagaaagtactctgtacaataatga 380

                                                                       
Query: 181 actacattaacaatttgaattccacccacagaattgacaagaaagtagttcaacagaatc 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 actacattaacaatttgaattccacacacagaattgacaagaaagtagttcaacagaatc 440

                                                                       
Query: 241 aaagccattagaatctaagaagtggaatctcatctgtatccatgggaaaatctagtctcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagccattagaatctaagaagtggaatctcatctgtatccatgggaaaatctagtctcc 500

                                                                       
Query: 301 ctaacttattggtcacttatttatttttctcttcaaaatgcactaagtacaatttattta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaacttattggtcacttatttatttttctcttcaaaatgcactaagtacaatttattta 560

                                                                       
Query: 361 cttgttgaattctgagggttattcaactgtcctgccctaactccagtttcactttgtgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttgttgaattctgagggttattcaactgtcctgccctaactccagtttcactttgtgat 620

                                                                       
Query: 421 caaacccagggatacagcttttagttgggcaccagctaaatttctatgtgttcagtggtc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaacccagggatacagcttttagttgggcaccagctaaatttctatgtgttcagtggtc 680

                                                                       
Query: 481 taagtaagtggtgccttcagtaatagggccttattgtgaggttctagaggggagctttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taagtaagtggtgccttcagtaatagggccttattgtgaggttctagaggggagctttct 740

                                                                       
Query: 541 tcttattttctattcctgtgataaaacactatgcccaaggtaacttacaaaaaaaagtct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcttattttctattcctgtgataaaacactatgcccaaggtaacttacaaaaaaaagtct 800

                                     
Query: 601 ttaatttggagattatggattctgaa 626
           ||||||||||||||||||||||||||
Sbjct: 801 ttaatttggagattatggattctgaa 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)