Query= MSMg01no517_p21.b1 MSMg01no517_p21.b1 CHROMAT_FILE:
MSMg01no517_p21.b1 PHD_FILE: MSMg01no517_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:16 2005
(569 letters)
>mm_chr15_35722543_35723512
Length = 970
Score = 1087 bits (562), Expect = 0.0
Identities = 565/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttagcaaagg-aaaaaaaaaggaacattcttaaagggcaagaataagagaaa 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gaattcatttagcaaaggaaaaaaaaaaggaacattcttaaagggcaagaataagagaaa 711
Query: 64 cagcttctctaggccaaatattaataaaatggtaataacagtcccatggaatagcttctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cagcttctctaggccaaatattaataaaatggtaataacagtcccatggaatagcttctt 651
Query: 124 ccctttgtcattagactgaatagacctggccatatggctgctttctaacaagagagaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ccctttgtcattagactgaatagacctggccatatggctgctttctaacaagagagaagg 591
Query: 184 aagctgaccaacaaattttaatttagaaggttcctagagtccgtgtttagtgagactgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aagctgaccaacaaattttaatttagaaggttcctagagtccgtgtttagtgagactgtc 531
Query: 244 aacatacaactccattctgacaatccagtgtttagcatctgaggagtttgagaaccaagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aacatacaactccattctgacaatccagtgtttagcatctgaggagtttgagaaccaagg 471
Query: 304 atacagagctcggtgaagctatgtgaccagtgaggcacagtgattaatgtcaagtgtcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atacagagctcggtgaagctatgtgaccagtgaggcacagtgattaatgtcaagtgtcta 411
Query: 364 gaactcagaggataaattttatttttctcttataactattcttaatgtttaattttcggc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaactcagaggataaattttatttttctcttataactattcttaatgtttaattttcggc 351
Query: 424 ctcagaaaaagatagtacagttaaaattcattatgaagccttctcaaagccacaaagtac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctcagaaaaagatagtacagttaaaattcattatgaagccttctcaaagccacaaagtac 291
Query: 484 tttctttggaacctccccaaattgtggttcatgtcagtaaaagaagcgaggagttgaaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tttctttggaacctccccaaattgtggttcatgtcagtaaaagaagcgaggagttgaaaa 231
Query: 544 attacaactttttgatgattttaaga 569
||||||||||||||||||||||||||
Sbjct: 230 attacaactttttgatgattttaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_p21.g1 MSMg01no517_p21.g1 CHROMAT_FILE:
MSMg01no517_p21.g1 PHD_FILE: MSMg01no517_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:16 2005
(497 letters)
>mm_chr15_35553693_35554590
Length = 898
Score = 932 bits (482), Expect = 0.0
Identities = 494/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Plus
Query: 1 atagccaagtagtaattacaaggaagcttacctaggattcatatgcagaggctacagagt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagccaagtagtaattgcaaggaagcttacctaggattcatatgcagaggctacagagt 260
Query: 61 aggagatagaggagtatttcatcacacatttgtttgctagtcatgtgttcacaagaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagatagaggagtatttcatcacacatttgtttgctagtcatgtgttcacaagaatgt 320
Query: 121 cagccttcggacttccgactatggaagtactcatgtctcttgggaattgccactcatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccttcggacttccgactatggaagtactcatgtctcttgggaattgccactcatcta 380
Query: 181 attcatagcacaaatggtatgtgctagaatcatgcagtgttcgtacaaccagtgcaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcatagcacaaatggtatgtgctagaatcatgcagtgttcgtacaaccagtgcaaaag 440
Query: 241 atctgatgacctgaatataagctgtaatagaagtaaatagtaccaacatttgtacataca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctgatgacctgaatataagctgtaatagaagtaaatagtaccaacatttgtacataca 500
Query: 301 tcattataagacttctcctgaaaaatttgttgatattttgtgagaaggtagtatttgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcattataagacttctcctgaaaaatttgttgatattttgtgagaaggtagtatttgaat 560
Query: 361 atttt-aataagttaatgagattttaataaatgaaggttgggtataatttatttttagta 419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttttaataagttaatgagattttaataaatgaaggttgggtataatttatttttagta 620
Query: 420 gagttaacaacataacagactagaagaatggtcttcatttgtcaaagtgaagaaatttta 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 gagttaacaacataacagactagaagaatggtcttcatttgtcaaagtgaagaaatttaa 680
Query: 480 aaagaaaatgagatcaat 497
||| ||||||||||||||
Sbjct: 681 aaaaaaaatgagatcaat 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 898
Length adjustment: 10
Effective length of query: 487
Effective length of database: 888
Effective search space: 432456
Effective search space used: 432456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
