Query= MSMg01no518_e06.b1 MSMg01no518_e06.b1 CHROMAT_FILE:
MSMg01no518_e06.b1 PHD_FILE: MSMg01no518_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:37 2005
(672 letters)
>mm_chr15_8462568_8463642
Length = 1075
Score = 1172 bits (606), Expect = 0.0
Identities = 651/674 (96%), Gaps = 15/674 (2%)
Strand = Plus / Minus
Query: 5 gaattccatgagatctgacgggaggagtagcaagctctgttcaaaactaaaactgagaag 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 940 gaattccatgagatctgacgggaggagtagcaagctttgttcaaaactaaaactgagaag 881
Query: 65 tagattaactatctgtaaccatggctaccttttctacaagccacagcctggtccttgagc 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 880 tagattaactatctgtaaccatggctacctttcctacaagccacagcctggtccttgagc 821
Query: 125 atctctccgtctctctgtctctctttcctcaggattcttctgctcagtagcattgcttcc 184
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 820 atctctccgtctctctgtctctctctcatcaggattcttctgctcagtagcattgcttcc 761
Query: 185 taccctggtctctcagttccattgaccatctcagctgaaatgatcctttgtgagcctcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 taccctggtctctcagttccattgaccatctcagctgaaatgatcctttgtgagcctcag 701
Query: 245 cgcacactctgaaggcaggggctgggggggggggaggttgctgtgagtgggtca------ 298
|||||||||||||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 700 cgcacactctgaaggcaggggctgggggtgggtg---ttgctgtgagtgggtcagcgaca 644
Query: 299 tgactgtgatggatccctttgagttctctggcatgatcaattagacgggagtagacagac 358
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 643 tgactgtgatggatccctttgagttctctggcatgatcaattagaccggagtagacagac 584
Query: 359 caccagcgtgtgcccttcttgaacaagagaggcaaagacagacatttgcaggctgacatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 caccagcgtgtgcccttcttgaacaagagaggcaaagacagacatttgcaggctgacatc 524
Query: 419 tgtgaatgattagcctgctgcctctacttgaacggcacattatagcatagcttcatggta 478
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgtgaatgattagcctgctgccactacttgaacggcacattatagcatagcttcatggta 464
Query: 479 tattattttaagggccacttcattttctcacatttttgttcagtttatgtgtatgtacat 538
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 463 tattattttaagggccacttcattttctcacatttttgttcagt------gtatgtacat 410
Query: 539 gtgcctcaatgagtttatatgtgtcacatgtatgcaggtgtccaaggagcacaaaggtta 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtgcctcaatgagtttatatgtgtcacatgtatgcaggtgtccaaggagcacaaaggtta 350
Query: 599 tcagatctcctgaaactgaagttacaggccagctgcccaacataggtgctgggaatatgg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tcagatctcctgaaactgaagttacaggccagctgcccaacataggtgctgggaatatgg 290
Query: 659 attgggggaccggc 672
||||||||||||||
Sbjct: 289 attgggggaccggc 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1075
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1065
Effective search space: 705030
Effective search space used: 705030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_e06.g1 MSMg01no518_e06.g1 CHROMAT_FILE:
MSMg01no518_e06.g1 PHD_FILE: MSMg01no518_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:37 2005
(363 letters)
>mm_chr15_8291068_8291824
Length = 757
Score = 663 bits (343), Expect = 0.0
Identities = 357/363 (98%), Gaps = 6/363 (1%)
Strand = Plus / Plus
Query: 1 agagttctctacctcccctttcggaattttagtgctccccacccccatttccttcatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagttctctacctcccctttcggaattttagtgctccccacccccatttccttcatcct 260
Query: 61 ccctctccaccttttcctggtaccggtaactttatatttgtattttggttaagttcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctctccaccttttcctggtaccggtaactttatatttgtattttggttaagttcatct 320
Query: 121 gttaagttcaactttcaaagagattctttggttatttatttattntnnacaaattacaat 180
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 321 gttaagttcaactttcaaagagattctttggttatttatttatt-t--acaaattacaat 377
Query: 181 actatttccttaatccttagattttagtaaaccaatttgtttaaacttcagggaagtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 actatttccttaatccttagattttagtaaaccaatttgtttaaacttcagggaagtcct 437
Query: 241 aaatttcacaaagtctatctcaaaacaacataatttttccaattactgttcacatgatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aaatttcacaaagtctatctcaaaacaacataatttttccaattactgttcacatgatac 497
Query: 301 nntttttaaattttgtacnagtagtacaaaattttggttactcttatagcaaaatgacaa 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 --tttttaaattttgtac-agtagtacaaaattttggttactcttatagcaaaatgacaa 554
Query: 361 ttt 363
|||
Sbjct: 555 ttt 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 757
Length adjustment: 9
Effective length of query: 354
Effective length of database: 748
Effective search space: 264792
Effective search space used: 264792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
