ATCCTTCCATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGTCATAGAAATCTTCCCTAGTGTGTGTGGCTGTTTCTGTG
TGTCTCTGTGTGTGTCTGTTGTTTCTTTCACTAACAAAAGGATTTGTTCC
CTATTTTAATAAACAGTACATAAAGCATCATATGGAGAAGAAATTAGGGA
CAATTTACAGAAATATTCAATAGATTTTTAAAGGTGGTTAAGCTTCTGAT
TCTAATGGATCCCAACTGACAAATATAACAAATGGTATTAAAAACATCAC
TGTTTATCAAGCAATATCAGTATTACATTCAACATTCACGGTAAATACTC
ATTTTATAAGGCCATTTTCAGTCTTTTTGCTATTTCTAGCAAATAGTTGT
TACAACACACATCCAGATATATATGTTTTACTCTTGGGTGAGGGTTATGT
AAGAGTATATAATTTAAAATATAAGATATGAATTAGCCTAGGGAGTGAAA
GTTTATTACATGGAAAATCCAAGGGAAGTAAGATTGATTGTTACATTATT
CTCTTAAAGACAGGTTAAACAAACTGACTGAGCACACAGTAGGGTAGCAA
TCTTAAACCATAAGCCATCTGATTGTATAGTATTAGTTCTGGCTCTGAGG
TACAGCAAAAATTTTATACTTTTGGTTATGAGCCTCGCCTTTAATGGTTG
AGCCATCTCTGCCCCACCTTGGGATCCAACCCATC

AAAGCCCGATGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAACATTAAAGATTCTAGA
ATACTAGTACTCACAAAAGCATCAATAGGTTAATGGCTATCAAAGCTAGG
GTGAAGAAAGGAAAAATATCATGACATAAAATCTGTCAGTAGATACTTTA
TTTTTTGATCTATTTTATAACAAGGTAAATGCAATTTATAGCAAAATACT
GTGCAGTAAAAAGCTAGAAAGATGGCCACTTCAAATTTTCTCATTATAGA
AGGATATTTAAGGAGTGGTAATATAAATTGATTTTATTTAATTATTTTTC
ATTGTATTAATATATGTGTGTATATAATATATGTATATTGTTTCAGCCTA
TATATGTTTATAGATAGAAAATGTTGTTATAATAAAATTCCAAAATATTT
ATTGTTTGGTTGGATTACTATATTTTCATAAATGGAGTGAAATTTTCTTT
TCTGATGAAAACTAAAATCAGAGCTAGATTTCATGCTTTACATACTTAAT
TTCAGCACTCCAGAGGCTAATGCAGATGAATTTCCATGCCTTCAAGGGGA
ATATAGGTATATAAAGAATTGGAAGTTAATCTAGGATTCATATTAAGACC
TTATCAGGAAAGGAAAAAAAACAATGCTAATTTATAGATAAATTCTCCAT
ATAAAACATTGTAACTTTATTCATGAACCTTGTGTTTTCT

Query= MSMg01no518_i12.g1 MSMg01no518_i12.g1 CHROMAT_FILE:
MSMg01no518_i12.g1 PHD_FILE: MSMg01no518_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:57 2005
         (660 letters)



>mm_chr15_46894752_46895812
          Length = 1061

 Score = 1263 bits (653), Expect = 0.0
 Identities = 660/663 (99%), Gaps = 3/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaacattaaagattctagaatactagtactcacaaaagcatcaataggttaatggctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 taaacattaaagattctagaatactagtactcacaaaagcatcaataggttaatggctat 258

                                                                       
Query: 61  caaagctagggtgaagaaaggaaaaatatcatgacataaaatctgtcagtagatacttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caaagctagggtgaagaaaggaaaaatatcatgacataaaatctgtcagtagatacttta 318

                                                                       
Query: 121 ttttttgatctattttataacaaggtaaatgcaatttatagcaaaatactgtgcagtaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttttttgatctattttataacaaggtaaatgcaatttatagcaaaatactgtgcagtaaa 378

                                                                       
Query: 181 aagctagaaagatggccacttcaaattttctcattatagaaggatatttaaggagtggta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aagctagaaagatggccacttcaaattttctcattatagaaggatatttaaggagtggta 438

                                                                       
Query: 241 atataaattgattttatttaattatttttcattgtattaatatat--gtgtgtatataat 298
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 439 atataaattgattttatttaattatttttcattgtattaatatatatgtgtgtatataat 498

                                                                       
Query: 299 atatgtatattgtttcagcctatatatgtttatagatagaaaatgttgttataataaaat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atatgtatattgtttcagcctatatatgtttatagatagaaaatgttgttataataaaat 558

                                                                       
Query: 359 tccaaaatatttattgtttggttggattactatattttcataaatggagtgaaattttct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tccaaaatatttattgtttggttggattactatattttcataaatggagtgaaattttct 618

                                                                       
Query: 419 tttctgatgaaaactaaaatcagagctagatttcatgctttacatacttaatttcagcac 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttctgatgaaaactaaaatcagagctagatttcatgctttacatacttaatttcagcac 678

                                                                       
Query: 479 tccagaggctaatgcagatgaatttccatgccttcaaggggaatataggtatataaagaa 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tccagaggctaatgcagatgaatttccatgccttcaaggggaatataggtatataaagaa 738

                                                                       
Query: 539 ttggaagttaatctaggattcatattaagaccttatcaggaaaggaaaaaaaa-caatgc 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 739 ttggaagttaatctaggattcatattaagaccttatcaggaaaggaaaaaaaaacaatgc 798

                                                                       
Query: 598 taatttatagataaattctccatataaaacattgtaactttattcatgaaccttgtgttt 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 taatttatagataaattctccatataaaacattgtaactttattcatgaaccttgtgttt 858

              
Query: 658 tct 660
           |||
Sbjct: 859 tct 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1061
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1051
Effective search space:   683150
Effective search space used:   683150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)