Query= MSMg01no518_l24.b1 MSMg01no518_l24.b1 CHROMAT_FILE:
MSMg01no518_l24.b1 PHD_FILE: MSMg01no518_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:15 2005
(605 letters)
>mm_chr15_44378265_44379270
Length = 1006
Score = 1079 bits (558), Expect = 0.0
Identities = 591/602 (98%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 5 gaattctttaa-aatactgttcattctcaggggtggtttggactgtggatttttgaagag 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaacaatactgttcattctcaggggtggtttggactgtggatttttgaagag 264
Query: 64 tatttccccatgcaaacaggatcttgtacctctacagtgccggtacctgccatctttaat 123
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 265 tatttccccatgcaaacaggatcttgtacctctacagtgccagtgcctgccatctttaac 324
Query: 124 tcactcactgtgtggaactgtcaaaaaggagctgaatgggtgaacggaggggccctgcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcactcactgtgtggaactgtcaaaaaggagctgaatgggtgaacggaggggccctgcag 384
Query: 184 ttccacaactttgtgatggtgaacaacaatgaggctggcattgagaccaagaggatcctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttccacaactttgtgatggtgaacaacaatgaggctggcattgagaccaagaggatcctg 444
Query: 244 gctccctatgttggaggatggggggaaagcaatggagctgtgattaaaaatgccaaaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctccctatgttggaggatggggggaaagcaatggagctgtgattaaaaatgccaaaatc 504
Query: 304 gttggtcatcttgatgagctgggaatggaacccacattttgcacctcaaaaggcctggtt 363
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 505 gttggtcatcttgatgagctgggaatgggacccacattttgcacttcaaaaggcctggtt 564
Query: 364 ctcccatttagtcaaggcctgactgtgtcatctgtatactttatgaattttgaccgccat 423
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 565 ctcccatttagtcaaggcctgactgtgtcgtctgtgcactttatgaattttgaccgccat 624
Query: 424 gcctgtgtggctttaggagtaacatcaatcactggggtgtgtaatgacagatgtggaggc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcctgtgtggctttaggagtaacatcaatcactggggtgtgtaatgacagatgtggaggc 684
Query: 484 tggagtgctaagtttgttggcatccggtattttcatgcacccaataaggctggttttcgt 543
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 tggagtgctaagtttgttggcatccggtattttcatgcacccaataagggtggttttcgt 744
Query: 544 tgggaacacgaagcagtgctgattgacgttgacggctcactaacaggtaatattattctc 603
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgggaacacgaagcagtactgattgacgttgacggctcactaacaggtaatattattctc 804
Query: 604 ca 605
||
Sbjct: 805 ca 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1006
Length adjustment: 10
Effective length of query: 595
Effective length of database: 996
Effective search space: 592620
Effective search space used: 592620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_l24.g1 MSMg01no518_l24.g1 CHROMAT_FILE:
MSMg01no518_l24.g1 PHD_FILE: MSMg01no518_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:15 2005
(422 letters)
>mm_chr15_44552214_44553039
Length = 826
Score = 779 bits (403), Expect = 0.0
Identities = 417/423 (98%), Gaps = 4/423 (0%)
Strand = Plus / Minus
Query: 1 atctcctttagaatgggaaaagtttctcttaggcagtatacagatatatgtattaattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atctcctttagaatgggaaaagtttctcttaggcagtatacagatatatgtattaattgc 564
Query: 61 cggaatctgacccagtaagcaaatttgcaccctgagagaggagctctgatttttattttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggaatctgacccagtaagcaaatttgcaccctgagagaggagctctgatttttattttc 504
Query: 121 actgaaacaagggcatgcaaatggaggggaaggcacagatagcatgtgatgggatagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgaaacaagggcatgcaaatggaggggaaggcacagatagcatgtgatgggatagctg 444
Query: 181 gacagtctcagcccatagaggggcccacctctgggtcacagggccaaaagttactggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gacagtctcagcccatagaggggcccacctctgggtcacagggccaaaagttactggcaa 384
Query: 241 ctaaggaaggatatagcacatttgcagaca--gtgtgttaactaccattcacttctagaa 298
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 383 ctaaggaaggatatagcacatttgcagacacagtgtgctaactaccattcacttctagaa 324
Query: 299 acaaatgttcccatgcgaagtaatatgtccaaaatt--aaaaaaaaaaaaagcaataaat 356
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 323 acaaatgttcccatgcgaagtaatatgtccaaaatttaaaaaaaaaaaaaagcaataaat 264
Query: 357 aatacattgtcttgacgtgccaagttcattttgttccaggaactgggatatttcatcatt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatacattgtcttgacgtgccaagttcattttgttccaggaactgggatatttcatcatt 204
Query: 417 ata 419
|||
Sbjct: 203 ata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 826
Length adjustment: 9
Effective length of query: 413
Effective length of database: 817
Effective search space: 337421
Effective search space used: 337421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
