Query= MSMg01no519_g21.b1 MSMg01no519_g21.b1 CHROMAT_FILE:
MSMg01no519_g21.b1 PHD_FILE: MSMg01no519_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:08 2005
(642 letters)
>mm_chr15_69276722_69277764
Length = 1043
Score = 1094 bits (566), Expect = 0.0
Identities = 599/610 (98%), Gaps = 1/610 (0%)
Strand = Plus / Minus
Query: 32 atatatataaaatttgtagtcttttcctcttgt-gttcaagccattcttttcctccagat 90
||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 841 atatatatataatttgtagtcttttcctcttgtggttcaagccactcttttcctccagat 782
Query: 91 gcataaagacaatgaagtgggcatcaattctcctggtcctctagcttgctgagtcaggct 150
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 781 gcataaagacaatgaagtgggcatcaattctcctggtcctgtagcttgctgagtcttgct 722
Query: 151 actcctagtgcatgcggccaatagtcttctacaaaagtagacgagaacacagcaggaatc 210
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 721 actcctggtgcatgcggccaatagtcttctacaaaagtagacaagaacacagcaggaatc 662
Query: 211 aaacctggaagtcaaagtctcagaattcatttgttgggtgtcatttaatatatagtcaaa 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaacctggaagtcaaagtctcagaattcatttgttgggtgtcatttaatatatagtcaaa 602
Query: 271 tctcagctgatcagaaggtctggataagcaagaatattgagctagaagtactccatggag 330
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 601 tctcagctgatcagaaagtctggacaagcaagaatattgagctagaagtactccatggag 542
Query: 331 tgagtattgattatacccttaatggcactgcagagtattgactgagaattcaattagaag 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgagtattgattatacccttaatggcactgcagagtattgactgagaattcaattagaag 482
Query: 391 taattatgccctttaaactaatatgcccaattgaaaaggttggaactttcaacgaactcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taattatgccctttaaactaatatgcccaattgaaaaggttggaactttcaacgaactcc 422
Query: 451 acagattcttgagtgatgatggaatgctcataaacagaggacatacaccaagcttttctt 510
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 421 acagattcttgagtgatgatggaatgctcataaacagagaacatacaccaagcttttctt 362
Query: 511 ggaacacaacaagttctttcagtctgcttgtagaagaaccatcagatattactgcaaaag 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaacacaacaagttctttcagtctgcttgtagaagaaccatcagatattactgcaaaag 302
Query: 571 acaggattcaaatggccttgggatgatggcagaatcattattatcttgatgatagctatc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaggattcaaatggccttgggatgatggcagaatcattattatcttgatgatagctatc 242
Query: 631 attttattat 640
||||||||||
Sbjct: 241 attttattat 232
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_g21.g1 MSMg01no519_g21.g1 CHROMAT_FILE:
MSMg01no519_g21.g1 PHD_FILE: MSMg01no519_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:08 2005
(458 letters)
>mm_chr15_69174801_69175654
Length = 854
Score = 832 bits (430), Expect = 0.0
Identities = 450/458 (98%), Gaps = 4/458 (0%)
Strand = Plus / Plus
Query: 1 actattcagataacatataaatgagagcaggatcacgagatagatgcatttttaaggaag 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 actattcagataacatataaatgagagcaggatcacgagataaatgcatttttaaggaag 260
Query: 61 aaacaatatatgctgtataccagagaaaacaagaaagagaaaaagccatcctactatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaatatatgctgtataccagagaaaacaagaaagagaaaaagccatcctactatgga 320
Query: 121 atgacattggtaaaaatttaactaaggcataaacagtttatataataaagatgttattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgacattggtaaaaatttaactaaggcataaacagtttatataataaagatgttattga 380
Query: 181 tctacctgatagttgaaagaaaggaaggcccactaaaaagttattccaagaatgcaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tctacctgatagttgaaagaaaggaaggcccactaaaaagttattccaagaatgcaaaga 440
Query: 241 tggtttactatcaaaaaaaaaaggaaaaaaaaccttttctatggaatattttaatttgtt 300
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tggtttactatcaaaaaaa---ggaaaaaaa-ccttttctatggaatattttaatttgtt 496
Query: 301 aatagtttttaatgtcttctggaaatgagcttaccctgtacatagagggcatcattttcc 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 497 aatagtttttaatgtcttctggaaatgagcttaccctgtacatagaggtcatcattttcc 556
Query: 361 tctgaccctgattccatcccgttacacactctacttctgtgctgttttcctttctttaaa 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 557 tctgaccctgattccatcccgttacacactctacttctgtgctcttttcctttctttaaa 616
Query: 421 aattatgttttacacacctaccctttcctcttagctgt 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aattatgttttacacacctaccctttcctcttagctgt 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 854
Length adjustment: 10
Effective length of query: 448
Effective length of database: 844
Effective search space: 378112
Effective search space used: 378112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|