XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAA
GTAATGGATTGCATGAATGAAATACCATGTGGATGTTGTGAATCAAACCC
AGGTTTTCCACAAAGTAACAAGTGCTCTTAACTGCTGAGCCATCTCTTCA
ACCTCAACACATTTTTAAAAAGGGCTTTACTTTTGTTTTACTAATGCCAT
GTAGCCACAATTACAGTGTCATACAGAATAGTAGTTTCCTTAACCTAAAA
TATATACTCTACAGATCTCTCTCTCTCTCTCTCTCCACCCCCCCCCCTTG
GTAGTAACTGTTCCTCGTACTACACCCTAGCTCTACAACAGGAACTGTAT
TAGCATGGAGCTACTGCTTACTACCATAAATCCCACACACTGAATGCTTT
GCTTGAATTATTTAATTGACTCTACTAAAGCCTATGTGGTAAGTAGGATC
AACGCCATGGCAAGAACGAAGATAAGACTTGGGTAGGTCTAGTCACCTGT
ATGAAATCATACAGCTTGGCATGGATAGAGTCAAAGCTTTGGGGCTAGAA
AAAACTGCCTTTTCCTAAAAGCCTATCTTAATTGCCCCCATTATACGGGG
AAAATATAGAAATTTCAAAACCACAACTTTTTAAAAATTCTGGCTTTAAT
TTTTTTCCCAAGCCCAAAACCCCTTTTAAAAAGGTGGTGCTCCAAATTGG
CCCCCCAAATGGGAGGGGAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTGACTTACTATCCATGGTCAGAGTACCCCA
CACTGGTCTGAATGTCTGGATTAGTGTCCTAAGAGGTTTCATAACTGAAG
TGGGGTCAGGTATGGTTAACACTTGAATAGAGATAATTCAGTGTACTGTT
GCTTCAAAATATTTTAAAATTCTTTTTTGATTATAATTCAACCAATTATT
TCTGTTTAATATAAGAAAAGAGCAGAGAATTTTGCTTTGGTTTGTTTTTA
ATACATCTTTTACCTCCTCCAATCCCTCTCATGCCCTTCTAAATTGATGG
TCTCTTTCTCTATGATTGATATGCATGTGCATGGTGCATATGTATATATA
TATATATATATATATACCGTATAAATGCAGCTTTCTGAATCTTTTTATGT
GTATCAAATATAAGGGTGACTGACTATTTATATTGGATAACAATTTAGTG
GCCTTATTCCAGAGAGAGGATGGTTCTTCCCCTTCAGCAGTCTTGGTTAC
TGGAGTTCTTTGTCTAAGGGTGTAACCCTGTGGTATTTTTGCTCCTCTGG
TATTAACACGTTTACTAATAGTACCATTGCTCAAGTCTTTCTTCCACGGC
CATTTCTATGAGACACAGCTCATAGCAGACATTGCTCCCCTGGCCTTTAC
AATCTTTCTCCCTACCTTTCCATATCTCCTGAGCCTTACTTAGGCTCA

Query= MSMg01no519_h09.g1 MSMg01no519_h09.g1 CHROMAT_FILE:
MSMg01no519_h09.g1 PHD_FILE: MSMg01no519_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:11 2005
         (674 letters)



>mm_chr15_4198722_4199795
          Length = 1074

 Score =  681 bits (352), Expect = 0.0
 Identities = 448/518 (86%), Gaps = 59/518 (11%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgacttactatccatggtcagagtaccccacactggtctgaatgtctggattagtgtcc 60
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 518 ctgacttactatccatggtcagagtaccccacactggtctggatgtctggatgagtgtcc 459

                                                                       
Query: 61  taagaggtttcataactgaagtggggtcaggtatggttaacacttgaatagagataattc 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 taagaggtttcagaactgaagtggggtcaggtatggttaacacttgaatagagataattc 399

                                                                       
Query: 121 agtgtactgttgcttcaaaatattttaaaattcttttttgattataattcaaccaattat 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 398 agtgtactgttgcttcaaaatattttaaaattcttttttggttataattcaaccaattat 339

                                                                       
Query: 181 ttctgtttaatataagaaaagagcagagaattttgctttggtttgtttttaatacatctt 240
           |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 338 ttctgtttaatataagaacagagcagagaattttgctttgttttgtttttaatacatctt 279

                                                                       
Query: 241 ttacctcctccaatccctctcatgcccttctaaattgatggtctctttctctatgattga 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tttcctcctccaatccctctcatgcccttctaaattgatggtctctttctctatgattga 219

                                                                       
Query: 301 tatgcatgtgcatggtgcatatgtatatatatatatatatatatata------------- 347
           |||||||||||||||||||| ||||||||||||||||||||||||||             
Sbjct: 218 tatgcatgtgcatggtgcatgtgtatatatatatatatatatatatatatatatatatat 159

                                                                       
Query: 348 ---------------------------------------------ccgtataaatgcagc 362
                                                        | |||||||||||||
Sbjct: 158 atatatatatatatatatatatatatatatatatatatatatatacagtataaatgcagc 99

                                                                       
Query: 363 tttctgaatctttttatgtgtatcaaatataaggg-tgactgactatttatattggataa 421
           ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 98  tttctgaatctttttatgtgtatgaaatataagggctgactgactatttatattggataa 39

                                                 
Query: 422 caatttagtggccttattccagagagaggatggttctt 459
           |||||||||||||||||||||||||||| |||||||||
Sbjct: 38  caatttagtggccttattccagagagagaatggttctt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space:   706496
Effective search space used:   706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)