Query= MSMg01no519_j07.b1 MSMg01no519_j07.b1 CHROMAT_FILE:
MSMg01no519_j07.b1 PHD_FILE: MSMg01no519_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:20 2005
(644 letters)
>mm_chr15_29910461_29911504
Length = 1044
Score = 1149 bits (594), Expect = 0.0
Identities = 609/614 (99%)
Strand = Plus / Minus
Query: 31 cctaaaactttgaaatgtcatatttgtaagtatggcattacatctttaaataaattttgt 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 cctaaaactttgaaatgtcatatttgtaagtatggcattacatctttaaataaattttgt 985
Query: 91 agtataacctttttcataatattaattctgtcaatgcaagaatatgtgccaccatcccat 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 agtataacctttttcataatattaattctgtcaatgcaagaatatgtgccaccatcccat 925
Query: 151 cagctactgtctttattgattttcttttataatgttgtgatgttttcattgtctttctct 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 cagctactgtctttattgattttcttttataatgttgtgatgttttcattgtctttctct 865
Query: 211 ttttgttaggtatatacctaaatgtgtatttagtagagttattttgtatggaatattttt 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttttgttaggtatatacctaaatgtgtatttagtagagttattttgtatggaatattttt 805
Query: 271 cttaattaagttctctgagaacacgttagtacacatgtaatctgtcttttatattgattt 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cttaattaagttctctgagaacacgttagtacacatgtaatctgtcttttatattgattt 745
Query: 331 tgtacactgtaattttaagtatttaataggtataaaagtttctagtaaattctatatatt 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtacactgtaattttaagtatttaataggtataaaagtttctagtaaattctatatatt 685
Query: 391 cctttagattatttatgttaaaagttaatgttttattatcatatgaccagcaaacattat 450
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cctttagattatttatgttaatagttaatgttttattatcatatgaccagcaaacattat 625
Query: 451 tctttggtatgtttaaaacacatgtattaccctatttcaatttaaaaatatttttataag 510
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctttggtatgtttaaaacacatatattaccctatttcaatttaaaaatatttttataag 565
Query: 511 caaaaacattcatatattaaaacatgttcatattgttttttcacctatagggttgcatac 570
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 564 caaaaacattcatatattaaaacatgttcatattgttgttccacctatagggttgcatac 505
Query: 571 cccttcagatccttgggtgctttctctagcttctccattggggtccctgtgttctatctt 630
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 504 cccttcagatccttgggtgctttctctagcttctccattggggtccctatgttctatctt 445
Query: 631 atagatgactatga 644
||||||||||||||
Sbjct: 444 atagatgactatga 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_j07.g1 MSMg01no519_j07.g1 CHROMAT_FILE:
MSMg01no519_j07.g1 PHD_FILE: MSMg01no519_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:20 2005
(668 letters)
>mm_chr15_29793765_29794836
Length = 1072
Score = 1265 bits (654), Expect = 0.0
Identities = 666/672 (99%), Gaps = 4/672 (0%)
Strand = Plus / Plus
Query: 1 tttttttcttaagatgctttggtccgagtattttattgcagcaagggaaaacagaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttttcttaagatgctttggtccgagtattttattgcagcaagggaaaacagaaaaat 260
Query: 61 taactaacaaatttaagaggtccaaactattgggattccaatgagaaaaaaaaaa----g 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 taactaacaaatttaagaggtccaaactattgggattccaatgagaaaaaaaaaaaaaag 320
Query: 117 cacctaatacttcaaaagttaccctgccatatctgtatcattattaacgtagcattgtct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacctaatacttcaaaagttaccctgccatatctgtatcattattaacgtagcattgtct 380
Query: 177 atgaagtcctctggaggagaagcatttagaacaaatttctagcttgctttctgcatctaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaagtcctctggaggagaagcatttagaacaaatttctagcttgctttctgcatctaa 440
Query: 237 acctaccccagggaaaacattagtactatctcttgataattatttccagtctaatactct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctaccccagggaaaacattagtactatctcttgataattatttccagtctaatactct 500
Query: 297 ttctcaggattttccttcttatccaggactgcaaccactatataactgtcataaaatgag 356
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 ttctcaggattttccttcttatccaggactgcgaccactatataactgtcataaaatgag 560
Query: 357 tggaaagtttctgacaaaatctcttcatcacagggctttcacatctagattatgtgatgt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaaagtttctgacaaaatctcttcatcacagggctttcacatctagattatgtgatgt 620
Query: 417 taatgttttcctctctagtaattatggaatccatattctaggtttagtcaatgtaaatgt 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 taatgttttcctctctagtaattatggaatccatattctaggtttagtcaatgtgaatgt 680
Query: 477 gtctttattcaaccaataaggatcaaagctctcagattgtaatgtaaattttaatttccc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctttattcaaccaataaggatcaaagctctcagattgtaatgtaaattttaatttccc 740
Query: 537 attacagtcagaagaaaaatctatttaatcacaaaggagtttacttccaacaagtgaaat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attacagtcagaagaaaaatctatttaatcacaaaggagtttacttccaacaagtgaaat 800
Query: 597 tcaacaaatcccaggacagtgaggaaatacagagtggagggaaatgcctggatttttttc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcaacaaatcccaggacagtgaggaaatacagagtggagggaaatgcctggatttttttc 860
Query: 657 tttttccttaaa 668
||||||||||||
Sbjct: 861 tttttccttaaa 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1072
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1062
Effective search space: 698796
Effective search space used: 698796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
