Query= MSMg01no520_l08.b1 MSMg01no520_l08.b1 CHROMAT_FILE:
MSMg01no520_l08.b1 PHD_FILE: MSMg01no520_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:50 2005
(644 letters)
>mm_chr15_51371650_51372693
Length = 1044
Score = 333 bits (172), Expect = 3e-95
Identities = 175/176 (99%)
Strand = Plus / Minus
Query: 5 gaattcattaaagctaaccctccctggaataggaacttcggacctggagacttggacttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaattcattaaagctaaccctccctggaataggaacttcggacctggagacttggacttt 319
Query: 65 gcacatgctgtgcttcgcagtctataaataggttgactcgtttttcaaatgtttaccctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcacatgctgtgcttcgcagtctataaataggttgactcgtttttcaaatgtttaccctt 259
Query: 125 tcttaccttcttgtttagggagtccataagctttgagatagtaaaagaaggagatg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 258 tcttaccttcttgtttagggagtccataagctttgagatagtaagagaaggagatg 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_l08.g1 MSMg01no520_l08.g1 CHROMAT_FILE:
MSMg01no520_l08.g1 PHD_FILE: MSMg01no520_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:50 2005
(574 letters)
>mm_chr15_51219812_51220785
Length = 974
Score = 1060 bits (548), Expect = 0.0
Identities = 564/574 (98%), Gaps = 8/574 (1%)
Strand = Plus / Plus
Query: 1 aaaactcttcccgtgcacacctactgaaaaaacacatccttcatatgagaccaatcctga 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaactcttccagtgcacacctactgaaaaaacacatccttcatatgagaccaatcctga 260
Query: 61 gaaagtttccaatgtctttttatacccatactttgaaaaaattatatgatgagttaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagtttccaatgtctttttatacccatactttgaaaaaattatatgatgagttaggtg 320
Query: 121 tgtatgatattgtggtttccagccataccttgacgtgactccctaatgtttgaaataatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatgatattgtggtttccagccataccttgacgtgactccctaatgtttgaaataatt 380
Query: 181 tccaagagcatagtttcatttactttaatcactgaataattcattcacataccaaagcac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tccaagagcatagtttcatttactttaatcactgaataattcattcacataccaaatcac 440
Query: 241 ccaggaaacaaatagtactattggttagttggttttctgagacaaggtttcatgctgtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaggaaacaaatagtactattggttagttggttttctgagacaaggtttcatgctgtgg 500
Query: 301 cctaggatggttcagtaccactactctcttgttacttttcttttctctaaaccattctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctaggatggttcagtaccactactctcttgttacttttcttttctctaaaccattctcc 560
Query: 361 atgctctgttataagttcttgggtcttttttactaattcctaccatgatagatagatagg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgctctgttataagttcttgggtcttttttactaattcctaccatgatagatagatag- 619
Query: 421 tagatagataggtagatagatagatagatagatagatagatagatagatagatagataga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 -------ataggtagatagatagatagatagatagatagatagatagatagatagataga 672
Query: 481 tagatagatagatagcttatgtaatgtcatttgtatgcatatttttagggctcagtctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tagatagatagatagcttatgtaatgtcatttgtatgcatatttttagggctcagtctgt 732
Query: 541 ggtataggataaccaatttacaggctttttcctg 574
||||||||||||||||||||||||||||||||||
Sbjct: 733 ggtataggataaccaatttacaggctttttcctg 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
