Query= MSMg01no521_b11.b1 MSMg01no521_b11.b1 CHROMAT_FILE:
MSMg01no521_b11.b1 PHD_FILE: MSMg01no521_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:19 2005
(581 letters)
>mm_chr15_50144860_50145838
Length = 979
Score = 1069 bits (553), Expect = 0.0
Identities = 574/581 (98%), Gaps = 2/581 (0%)
Strand = Plus / Minus
Query: 1 taatcactaaacacaaagctttatcataagtaaagacatattccaattgcctaatggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 taatcactaaacacaaagctttatcataagtaaagacatattccaattgcctaatggaga 720
Query: 61 aaatattttttcctgaaattaaaataaatttaagaatatgtccaattactctttggtgtt 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 719 aaata-tttttcctgaaattaaaataaatttaagaatatgtccaattactctttggtg-t 662
Query: 121 ttttttctaataataaaatgtcaggcatttgtggatacacagactatttcattatataat 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 661 ttttttctaataataaaatgtcaggcacttgtggatacacagactatttcattatataat 602
Query: 181 aaatgtccagttctacttaaatgattcctctcaaacttgctgggtacagatagtatgcta 240
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatgtccagttctacttaaatgactcctctcaaacttgctgggtacagatagtatgctg 542
Query: 241 cagtggaacaaacaaaacagacagcatcttttgatctactttgtggtttcttcctagtgc 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagtggaacaaacaaaacagacaacatcttttgatctactttgtggtttcttcctagtgc 482
Query: 301 atttttctttccttctaattatctcttccatagcttctaggatttagtgtttaggcaaag 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atttttctttccttctgattatctcttccatagcttctaggatttagtgtttaggcaaag 422
Query: 361 tgatataaagagcaaataattcttagtacatagacattgttatgagctggcatttatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgatataaagagcaaataattcttagtacatagacattgttatgagctggcatttatgtt 362
Query: 421 ttctagaattagtgggtttaaaggctattaattgtgaatgtaattttatttttaatacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttctagaattagtgggtttaaaggctattaattgtgaatgtaattttatttttaatacag 302
Query: 481 tttctacaattagtatgtctatatgtacagtatggttgcaggtttgactagtacatgctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttctacaattagtatgtctatatgtacagtatggttgcaggtttgactagtacatgctt 242
Query: 541 ttcatagaaattttttttggaaatttcctataggtttctgt 581
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcatagaaattttttttggaaatttcctataggtttctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 979
Length adjustment: 10
Effective length of query: 571
Effective length of database: 969
Effective search space: 553299
Effective search space used: 553299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_b11.g1 MSMg01no521_b11.g1 CHROMAT_FILE:
MSMg01no521_b11.g1 PHD_FILE: MSMg01no521_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:19 2005
(572 letters)
>mm_chr15_50006930_50007901
Length = 972
Score = 470 bits (243), Expect = e-136
Identities = 252/255 (98%)
Strand = Plus / Plus
Query: 1 atttaataggatcagaatcaattaactttttaatttatttattattttgtctatttatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttaataggatcagaatcaattaactttttaatttatttattattttgtctatttatat 260
Query: 61 ttcaaatgtcctccctaaagctctcgcaagtgctgtagctggtgacagctctctcaactg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaatgtcctccctaaagctctcgaaagtgctgtagctggtgacagctctctcaactg 320
Query: 121 ccatagatggcaggaatgggggaggttatctctctctggccaacaagaccacacagagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatagatggcaggaatgggggaggttatctctctctggccaacaagaccacacagagag 380
Query: 181 atataagagtgaaagagttggctctgacccttgctggctgcagtactgagctctctagcc 240
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 atataagagtgagagagttggctctgtcccttgctggctgcagtactgagctctctagcc 440
Query: 241 agggtggtgaaggac 255
|||||||||||||||
Sbjct: 441 agggtggtgaaggac 455
Score = 136 bits (70), Expect = 6e-36
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 499 gacccagattcaggactttgaattggcctgccccatctgggaatggctggagcacatgaa 558
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 453 gacccagattcaggactttgaattggcctaccccatctgggaatggctggagcacatgaa 512
Query: 559 ggggccagtcctat 572
||||||||||||||
Sbjct: 513 ggggccagtcctat 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
