Query= MSMg01no521_b14.b1 MSMg01no521_b14.b1 CHROMAT_FILE:
MSMg01no521_b14.b1 PHD_FILE: MSMg01no521_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:20 2005
(532 letters)
>mm_chr15_35381014_35381945
Length = 932
Score = 978 bits (506), Expect = 0.0
Identities = 522/532 (98%), Gaps = 8/532 (1%)
Strand = Plus / Plus
Query: 1 tattttggattcccaccccattttacttaattattttaggtggttttaaattctttaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattttggattcccaccccattttacttaattattttaggtggttttaaattctttaaca 260
Query: 61 aatatcattttggggctggagatttgtagaactcagctcctacatccagcacccactttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatcattttggggctggagatttgtagaactcagctcctacatccagcacccactttg 320
Query: 121 cagctcacgaccacctgtaactaggggatttgacaacctcttctgacttctgtgggcacc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 cagctcacgaccacctgtaactaggggatttgaaaacctcttctgacttctgtgggcacc 380
Query: 181 aggcccatatgtggtacacagacatacatgcagggaaaatattcacacataaaataaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcccatatgtggtacacagacatacatgcagggaaaatattcacacataaaataaata 440
Query: 241 aatcaaaaaggaagtctgtgtttgttgggatctctgtttccatctgtacatatcttcatt 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 aatcaaaaaggaagtctgtgtttgttgggatctctgtttccatctgtatatatcttcatt 500
Query: 301 tgtgtatttgtggtaaattgttttctctagtttatgtcttgtctttatgcatttaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtatttgtggtaaattgttttctctagtttatgtcttgtctttatgcatttaatttt 560
Query: 361 aatgatatattagtatgcagaaagttgatactcttttaaccaaagaaattaggaattatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgatatattagtatgcagaaagttgatactcttttaaccaaagaaattaggaattatt 620
Query: 421 gcaaagatataataaaaatatttaatttctatggagcaaagatttatacacatatacaca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaaagatataataaaaatatttaatttctatggagcaaagatttatacacatat----- 675
Query: 481 tatttcatccagtaacttgtattacaatctagagtaacttttgactatttca 532
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ---ttcatccagtaacttgtattacaatctagagtaacttttgactatttca 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_b14.g1 MSMg01no521_b14.g1 CHROMAT_FILE:
MSMg01no521_b14.g1 PHD_FILE: MSMg01no521_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:20 2005
(434 letters)
>mm_chr15_35506178_35507010
Length = 833
Score = 816 bits (422), Expect = 0.0
Identities = 431/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 1 ctacatgtgcaaacacattcctgtttctcgcgccttctcttaggatattttccttctctt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 832 ctacatgtgcaaacacattcctgtttctcgcgccttctcttaggatcttttccttctctt 773
Query: 61 ggttttgtctaactgcaaagtgttagtctttattttattttaaagtattgactcttaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ggttttgtctaactgcaaagtgttagtctttattttattttaaagtattgactcttaaga 713
Query: 121 gaactgtttattttctaatgaaagacagaatgaaagtggatccaggcaggaagtgtagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gaactgtttattttctaatgaaagacagaatgaaagtggatccaggcaggaagtgtagat 653
Query: 181 ggaggaaacaataagaagtacatattatgtgaggaaaatcaattttcaatttaagaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 652 ggaggaaacaataagaagtacatattatgtgaggaaaatcaattttcaatttaag-aaaa 594
Query: 241 aaagcaaacactggaaatcaaaaaatattaagccaaattttaagttaaaaaggtgtattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aaagcaaacactggaaatcaaaaaatattaagccaaattttaagttaaaaaggtgtattc 534
Query: 301 tcaagaaaaggaacattattgtaagttcccaagagaggcataagtgatggccatcagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tcaagaaaaggaacattattgtaagttcccaagagaggcataagtgatggccatcagaga 474
Query: 361 gagaagatgcataattcactaagagcacattatgcccatggtgtgtttacgaaatataaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 473 gagaagatgcataattcactaagagcacattatgcccatggtgtgtttaccaaatataaa 414
Query: 421 tatgcaagtataca 434
||||||||||||||
Sbjct: 413 tatgcaagtataca 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space: 350200
Effective search space used: 350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
