Query= MSMg01no521_g21.b1 MSMg01no521_g21.b1 CHROMAT_FILE:
MSMg01no521_g21.b1 PHD_FILE: MSMg01no521_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:46 2005
(504 letters)
>mm_chr15_7481563_7482466
Length = 904
Score = 915 bits (473), Expect = 0.0
Identities = 485/489 (99%)
Strand = Plus / Minus
Query: 5 gaattcaggactgggtgcatttcttttgcttgggggcttcttgctaatgacacattttat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gaattcaggactgggggcatttcttttgcttgggggcttcttgctaatgacacattttat 430
Query: 65 atttatctttcctcagtgtttcagcacttataagcaggatttgctttggtcagatgagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atttatctttcctcagtgtttcagcacttataagcaggatttgctttggtcagatgagct 370
Query: 125 tgtgtatgtaagtagctacctaccctttgagaggtgtagaaaaaaggaactttctaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtgtatgtaagtagctacctaccctttgagaggtgtagaaaaaaggaactttctaaaaa 310
Query: 185 caaagtgggaaacatctctttacgtgtacgctactttcctttcacctggagaccaccaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caaagtgggaaacatctctttacgtgtacgctactttcctttcacctggagaccaccaag 250
Query: 245 atcgtgcggctggcaaagggctgctctgttttctgtttgcattggatatttttatattta 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 249 atcgtgcggctggcaaagggctgctctgttttctgtttggattggatatttttatattta 190
Query: 305 atatttgtcttctgagtcaaaagtggttatctctccaaagaaaaatttgatggcttgaga 364
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atatttgtcttccgagtcaaaagtggttatctctccaaagaaaaatttgatggcttgaga 130
Query: 365 gctgggtgtttgtgctttccccttggaaatgttaacactgaagcagccttcagtgtgctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gctgggtgtttgtgctttccccttggaaatgttaacactgaagcagccttcagtgtgctt 70
Query: 425 caaagttagtaaccccccaagatgaattagtgacctgccctcgccccacccccatactag 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 69 caaagttagtaaccccccaagatgaattagtgacctgacctcgccccacccccatactag 10
Query: 485 ctgttacct 493
|||||||||
Sbjct: 9 ctgttacct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_g21.g1 MSMg01no521_g21.g1 CHROMAT_FILE:
MSMg01no521_g21.g1 PHD_FILE: MSMg01no521_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:46 2005
(522 letters)
>mm_chr15_7333033_7333954
Length = 922
Score = 948 bits (490), Expect = 0.0
Identities = 514/522 (98%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 1 agagacgagacaggaaaagaaaggccgtgttatcccaaacctggagtgtccagccctagg 60
|||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 201 agagacaagacaggaaaagaaaggtagtgttatcccaaacctggagtatccagccctagg 260
Query: 61 ttctagaaggctgaggggccctgaaaggaaaacatagtaaacatgagagtcacaagttca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ttctagaaggctgaggggccctgaaaagaaaacatagtaaacatgagagtcacaagttca 320
Query: 121 gaactgcattcagagaaagttattgtggcagattattgtcaaatcaaaggtggggagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaactgcattcagagaaagttattgtggcagattattgtcaaatcaaaggtggggagagg 380
Query: 181 gaagaaatacaacaaaaccctcaaaaactgggcctggagttgcataccagtaattccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagaaatacaacaaaaccctcaaaaactgggcctggagttgcataccagtaattccagc 440
Query: 241 actaagaaggaggagcaaggagatcagaaggccaagggcgttcttagccacactgtgcgt 300
||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 actaagaaggaggagcacggggatcagaaggccaagg-cgttcttagccacactgtgcgt 499
Query: 301 ctcaggccagcctagattatgtaagaccgcatctaacaaagtgggggaggggtgaaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctcaggccagcctagattatgtaagaccgcatctaacaaagtgggggaggggtgaaagac 559
Query: 361 agcatttaccacagaaatagcatctttgagctagagattagaatcattaagagaacatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agcatttaccacagaaatagcatctttgagctagagattagaatcattaagagaacatgc 619
Query: 421 tgttcttccacaggaccaaagtttggctcccagaattcatgttgggaagctcatggccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgttcttccacaggaccaaagtttggctcccagaattcatgttgggaagctcatggccat 679
Query: 481 ctatgaccacagctctaggggatctgatacctttgagcctca 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctatgaccacagctctaggggatctgatacctttgagcctca 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
