Query= MSMg01no524_p15.b1 MSMg01no524_p15.b1 CHROMAT_FILE:
MSMg01no524_p15.b1 PHD_FILE: MSMg01no524_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:25 2005
(585 letters)
>mm_chr15_35548365_35549349
Length = 985
Score = 982 bits (508), Expect = 0.0
Identities = 537/556 (96%), Gaps = 15/556 (2%)
Strand = Plus / Minus
Query: 4 ggaattcttggaatgtgcttgcctgatcctcccaggtataggggagtctatttcagttgt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaattcttggaatgtgtttgcctgatcctcccaggtataggggagtctatttcagttgt 482
Query: 64 tttttgtttatatgcctctgtaagaaaacatgtttttgccacgtgtgtcttgtccttgtg 123
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 481 tttttgtttatatgcctctgtaagaaaacatgtttttgccatgtgtgtcttgtccttgtg 422
Query: 124 attacacactttactccggtgactcttcttaaccctcagagtataaactgtctgatgctc 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 attacacactttactccggtgactcttcttaaccctcagagtataaactgcctgatgctc 362
Query: 184 tgaataaacttggctgctgcatgatactgtagtagtcagcctcatttttagtccctgctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaataaacttggctgctgcatgatactgtagtagtcagcctcatttttagtccctgctc 302
Query: 244 tcccaggttcacgcagccaactagtgtggtaaaaaacaacactatgaaaccaaattatat 303
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccaggttcacgcagccaactagcgtggtaaaaaacaacactatgaaaccaaattatat 242
Query: 304 agcatataacagaaagaagtagagagagtatccacagcatgattttgtgcataaagaaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcatataacagaaagaagtagagagagtatccacagcatgattttgtgcataaagaaac 182
Query: 364 ttgcaaccaagaccgataacctgaatttcattttcaatacccacatgcttaaaggacaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcaaccaagaccgataacctgaatttcattttcaatacccacatgcttaaaggacaga 122
Query: 424 aataactcctataaacacctcaataaatagacagatgatagacagacagatgatagatag 483
|||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 aataactcctataaacacctcaataaatagacagatgataga---------------tag 77
Query: 484 atagatgatgataaatagacagatggttgatagataaatagatagatagatagatagata 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atagatgatgataaatagacagatggttgatagataaatagatagatagatagatagata 17
Query: 544 gatagatagatagata 559
||||||||||||||||
Sbjct: 16 gatagatagatagata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_p15.g1 MSMg01no524_p15.g1 CHROMAT_FILE:
MSMg01no524_p15.g1 PHD_FILE: MSMg01no524_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:25 2005
(630 letters)
>mm_chr15_35391152_35392181
Length = 1030
Score = 1145 bits (592), Expect = 0.0
Identities = 616/630 (97%), Gaps = 10/630 (1%)
Strand = Plus / Plus
Query: 1 tcatgaagtattatctaatttcatactttcatcttttttgcttagatgatacaattcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgaagtattatctaatttcatactttcatcttttttgcttagatgatacaattcgat 260
Query: 61 tttttaaattttatagttatagtttaattttattaaattaacaaaatttgacttgagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttaaattttatagttatagtttaattttattaaattaacaaaatttgacttgagagg 320
Query: 121 ctatgtatttagtagacagacaatctaatgtcaggtaggatcagttgagtagtatgcaga 180
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 321 ctatgtatttagtagacagacaatctaatatcaggtaggatcagttaagtagtatgcaga 380
Query: 181 tattctaatcctgctttaatcgaactgtggatatgagctacagtggttaatcttgattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattctaatcctgctttaatcgaactgtggatatgagctacagtggttaatcttgattgt 440
Query: 241 cagcttgctggggttatttagattcacacagaaacaaatctgagagacggtctgtgaaga 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacttgctggggttatttagattcacacagaaacaaatctgagagacggtctgtgaaga 500
Query: 301 attacttaggttatgttagttgttgttggaagacccatcctaaatgtggttgttattatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attacttaggttatgttagttgttgttggaagacccatcctaaatgtggttgttattatt 560
Query: 361 ctatgggctgagatcctggactgaataaaaagcagaaagtgggcaagcaccagcatccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatgggctgagatcctggactgaataaaaagcagaaagtgggcaagcaccagcatccat 620
Query: 421 tgctttttgttttctttctttctttttttatgtataatctttttttgttttgttttgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctttttgttttctttctttctttttttatgtataatctttttttgttttgttttgttt 680
Query: 481 tgttttgtttttattggatattttcttagttatcctctttcctgccccaaccctgaaatc 540
| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 t----------tattggatattttcttagttatcctctttcctgccccaaccctgaaatc 730
Query: 541 ccttattccatccccttccccctacttctatgaaggtgttgtcccacctttccaccctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ccttattccatccccttccccctacttctatgaaggtgttgtcccacctttccaccctgg 790
Query: 601 cattcccctatactagggcattgagccttc 630
|||||||||||||| |||||||||||||||
Sbjct: 791 cattcccctatactggggcattgagccttc 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
