Query= MSMg01no525_i13.b1 MSMg01no525_i13.b1 CHROMAT_FILE:
MSMg01no525_i13.b1 PHD_FILE: MSMg01no525_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:11 2005
(429 letters)
>mm_chr15_103052051_103052880
Length = 830
Score = 789 bits (408), Expect = 0.0
Identities = 422/430 (98%), Gaps = 6/430 (1%)
Strand = Plus / Minus
Query: 6 gaattcattgattatccatctggatactacaaccaaataatttggtaattcagtgaagta 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaattcattgattatgcatctggatactacaaccaaataatttggtaattcagtgaagta 438
Query: 66 ttcaccagttagttatccatattgctttgtttctttaattggcaatgaaaaaaataatgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttcaccagttagttatccatattgctttgtttctttaattggcaatgaaaaaaataatgt 378
Query: 126 gcctgctatgccatgctcctttaagaagactagagctgagcagggactttgtggggagtt 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 377 gcctgctatgccatgctcctttaagaagactagagctgagcagggactttgtggagagtt 318
Query: 186 tggctcagtaattgcttaatgctaacagttagccattatacctattattctggattgata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tggctcagtaattgcttaatgctaacagttagccattatacctattattctggattgata 258
Query: 246 gggaccagcagatttctttactctagaattttgtgtcctc------cccccccccccttt 299
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 257 gggaccagcagatttctttactctagaattttgtgtcctctccccccccccccccccttt 198
Query: 300 ttttttctttgtgtagctctggctgttctggaaatcacagtgatgggtctgcttctacct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttttttctttgtgtagctctggctgttctggaaatcacagtgatgggtctgcttctacct 138
Query: 360 tcccagtgttcgaattaaaggtgtgtgtcatcccttctcttctttctgcaacacccccct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcccagtgttcgaattaaaggtgtgtgtcatcccttctcttctttctgcaacacccccct 78
Query: 420 acacacacac 429
||||||||||
Sbjct: 77 acacacacac 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_i13.g1 MSMg01no525_i13.g1 CHROMAT_FILE:
MSMg01no525_i13.g1 PHD_FILE: MSMg01no525_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:11 2005
(422 letters)
>mm_chr15_102862504_102863329
Length = 826
Score = 764 bits (395), Expect = 0.0
Identities = 421/439 (95%), Gaps = 17/439 (3%)
Strand = Plus / Plus
Query: 1 ttgtttcctcacccagctact-------------gggggggg-gggcgggaggaggagtg 46
||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 188 ttgtttcctcacccagctactgggggcgggggggggggggggcgggcgggaggaggagtg 247
Query: 47 ctgtctcttaggaagaggctaactaggactaagtcatgggtgccaagccctggtgagccc 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctgtctcttaggaagaggctaactaggactaagtcatgggtgccaagccctggtgagccc 307
Query: 107 aggttggggctggggctggggccctaagcattaggcagggaaagcagccagaggcacagg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aggttggggctggggctggggccctaagcattaggcagggaaagcagccagaggcacagg 367
Query: 167 cccaatctgcatctttggactttactgtggttccttcccattatagctctcaaagtgaac 226
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cccaatctgcatcttttgactttactgtggttccttcccattatagctctcaaagtgaac 427
Query: 227 cctaatttggaagaggggaccctctcccacatcccaaaggtggtgaaaagaatgttggga 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctaatttggaagaggggaccctctcccacatcccaaaggtggtgaaaagaatgttggga 487
Query: 287 atcttctcttttcagtatctccctcacggagcttttttttt---ctctccctcttccccc 343
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 488 atcttctcttttcagtatctccctcacggagcttttttttttttctctccctcttccccc 547
Query: 344 tcctcattcccttaattgcagatgttctaattaaaccctcaaatagttgttatgctgttt 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcctcattcccttaattgcagatgttctaattaaaccctcaaatagttgttatgctgttt 607
Query: 404 taaaaggtacttattcaag 422
|||||||||||||||||||
Sbjct: 608 taaaaggtacttattcaag 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 826
Length adjustment: 9
Effective length of query: 413
Effective length of database: 817
Effective search space: 337421
Effective search space used: 337421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
